G266980


Basic Information

Item Value
gene id G266980
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000065
NCBI id null
chromosome length 4956624
location 116324 ~ 117072 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU303019
TGTTTATTTAGACATCACCTTCCACAGCATGTCATTCTAATTTGACTATTCTTCAGTTAATGTTTGCAGCAGTTTTTTTCACTCATTCATAGCCATGATGTATTTACTACACTGTAATTTCACTGAAAATGAACATCGTAACACCACAAAACGAAGGTATTATTAAAGACATTATTATTTACACATTAGTATGAAACATCAGTTCAAAACAAACAAATCAAATAATTCTCTCTTGGCATCAGTATCAAGTGATCATGCAGTTATATCCAAAATAAATTAGAAAAAAATTGTTAAACTATTTTAAAAGACCATTAAAATGGGCAGCATTTATTTACTTAGTAAAGATGTCACATATTTGCCTCATAGTACAGCACTACTCCAACTGTGTGTTCCCTCATTTCTCTCCAGCTGGTTTTGTGTAAGTATGTGTTTAGTTTGAATAGAGAGTGTGTGTGTGTGTGTGTCTGTGTGTATGGCTCAGCACTGGCCTGAGCAAGAGAAGACCCAGACCAGCTTTTATTTTGTTCACACAAAGTAGTCTTTGTCTGTCAGTGCCTCTGCTCTCTCTCTCTCTCTCTCTCACACACACACACACACAGAAGGATTCAGTCCTCCTTCACATTATTGTTGGAATGCTGTGTTTTCAGGCTTTCAGGCTTGAAGCCGCAGGGTTTGCTGGGCAGGAGGATCACGGTCAGAATGCTGATGATATGCACATGAAAGTACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU303019 True 727 lncRNA 0.38 2 116324 117072

Neighbor

gene id symbol gene type direction distance location
CI01000065_00008351_00023809 NA coding upstream 91986 8351 ~ 24338 (+)
CI01000065_00001128_00004874 NA coding upstream 111140 1128 ~ 5184 (+)
CI01000065_00268067_00268655 NA coding downstream 150995 268067 ~ 268788 (+)
CI01000065_00390457_00395371 SALL3, SALL3A coding downstream 273385 390457 ~ 396151 (+)
CI01000065_00408239_00434714 NA coding downstream 291076 408148 ~ 435407 (+)
CI01000065_00466096_00487259 NA coding downstream 348904 465976 ~ 487278 (+)
CI01000065_00491304_00503042 NA coding downstream 374076 491148 ~ 503458 (+)
G266929 NA non-coding upstream 24677 76674 ~ 91647 (+)
G266974 NA non-coding upstream 42245 73674 ~ 74079 (+)
G266973 NA non-coding upstream 43652 72435 ~ 72672 (+)
G266969 NA non-coding upstream 46661 69422 ~ 69663 (+)
G266968 NA non-coding upstream 48067 68024 ~ 68257 (+)
G266981 NA non-coding downstream 12978 130050 ~ 141440 (+)
G267055 NA non-coding downstream 25443 142515 ~ 142795 (+)
G267060 NA non-coding downstream 37534 154606 ~ 154812 (+)
G267075 NA non-coding downstream 73407 190479 ~ 190688 (+)
G267081 NA non-coding downstream 79620 196692 ~ 197028 (+)
G266932 NA other upstream 71658 43038 ~ 44666 (+)
G267432 NA other downstream 665211 782283 ~ 782879 (+)
G267577 NA other downstream 965081 1082153 ~ 1082655 (+)
G268525 NA other downstream 2122087 2239159 ~ 2239998 (+)
G268805 NA other downstream 2491835 2608907 ~ 2638205 (+)
G269181 NA other downstream 3341885 3458957 ~ 3462928 (+)

Expression


Co-expression Network