G267056



Basic Information


Item Value
gene id G267056
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000065
NCBI id null
chromosome length 4956624
location 142508 ~ 143087 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU303102
CAAGATCTTTAGGATCCACGTTAATATTAGAAAAGCTTTCCAGCGCTGGAGAGAGCTAAGTGGGAAGGCCTGAAAACAGACACGGAGGCTGCTTTGATTCCGCTCCACACATGAGTAACACTGGGTTTGAGTGTCTGGAGCTGCTGTGCTGTTTGCCACTAACAACAAACTCTTGTTTGTATTTACTCTTGTGTACTGTATGTACATTTTTTTGTGCTTCCTTGTCATTCATTCATCATCTGCACTTTATTTTTCTTGAAGCATTATTTTGTTGTGCATCAGCTGTGATAAACAGACATCCACTCTCGCACTGTGTGTGTAACAGTGGCCAGATAGTGAGAGTTGAGCAGGAAAACCACTGCGCACTGACGGCCGCTAGAGAATGAGGTGTTTAGCGTCATTGTTAGTGCATTCGCCTCGCATGCCAGCAGTGAACGGGCTGGGGTTTGAGACCGACTCAGAGGAGGGTGGTTAGGATTAGAGTGTGAGTTTTGGAGGCGGAGCAATGAAGAGAGGGGTGAGTTTGTTTCGGTTGATTTCAAATATCAACAATGTCCAACAGCATTGTTCAAAATCTACT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU303102 True 580 lncRNA 0.45 1 142508 143087

Neighbor


gene id symbol gene type direction distance location
CI01000065_00120723_00133111 MBOAT1 coding downstream 9397 120406 ~ 133111 (-)
CI01000065_00097164_00097583 NA coding downstream 44918 96904 ~ 97590 (-)
CI01000065_00076766_00091631 NA coding downstream 50877 76685 ~ 91631 (-)
CI01000065_00050903_00055774 NA coding downstream 86734 50386 ~ 55774 (-)
CI01000065_00036512_00040370 NA coding downstream 102138 35848 ~ 40770 (-)
CI01000065_00253168_00255665 NA coding upstream 109604 252691 ~ 255710 (-)
CI01000065_00330696_00340165 NA coding upstream 187505 330592 ~ 340772 (-)
CI01000065_00444905_00447425 NA coding upstream 301593 444680 ~ 447425 (-)
CI01000065_00563411_00579174 MBPB, MBP coding upstream 419761 562848 ~ 580083 (-)
CI01000065_00622545_00624625 NA coding upstream 479036 622123 ~ 624657 (-)
G267047 NA non-coding downstream 30697 111111 ~ 111811 (-)
G267041 NA non-coding downstream 49510 92762 ~ 92998 (-)
G267039 NA non-coding downstream 68646 73518 ~ 73862 (-)
G267036 NA non-coding downstream 73487 68816 ~ 69021 (-)
G267035 NA non-coding downstream 75240 67010 ~ 67268 (-)
G267097 NA non-coding upstream 61182 204269 ~ 212348 (-)
G267106 NA non-coding upstream 75588 218675 ~ 218909 (-)
G267129 NA non-coding upstream 118275 261362 ~ 261598 (-)
G267136 NA non-coding upstream 124071 267158 ~ 267388 (-)
G267140 NA non-coding upstream 127524 270611 ~ 270859 (-)
G267024 NA other downstream 96421 43039 ~ 46087 (-)
CI01000065_00782736_00793467 NT5C3A, NT5C3 other upstream 639610 782697 ~ 793467 (-)
G269348 NA other upstream 3165356 3304357 ~ 3312480 (-)
G269679 NA other upstream 3630793 3773880 ~ 3774294 (-)

Expression



Co-expression Network