G267771


Basic Information

Item Value
gene id G267771
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000065
NCBI id null
chromosome length 4956624
location 594622 ~ 598770 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU303866
CAAACGTCCTCCACTGAGGATCTGGAGACAGCAGGGCCGGCGTCTGTGTGAATGTGGATGGTGCCAAACCCTGGCATTCAGACAAAACCAAGCCAATACATGATGATGATGATCATCAAATATCATCAGAAGAACAGATCTGAACATCAGCAGGTCTCTCATAATGAGCGCTGCTGTTATGATCTGATAACAGAGACTTCTCTGATTGGATCCCGCTTCAGGATTATATAATGTGGTTTTATAGTTCCGTTACTTGGGAATGTCGTTGTTTCGGTGAAGCGCTGAGCGAAGGAGAACGGTCACATGTCACTGCCAGAGCCTTTGGCACAGGTTTGTGTTTCATTCACTGAGCTCATGGAAGGTAACCGGTCAAGCCGGTTCACAGAATGGATCTTTATATTAGTGAATGAAAAAAAAAAAAAAAAAACCAAACATATTATTTGAGTAGTGATAGTTTTTAGACAGCTGATTAATCATTCTAATAAACGTTAGATTAATTGGTTTCCAAAATAATCGTTTTCACAGCCCTACTGTGGAGTTAAACATAGACGTTCTTGCTGTCAGGATCATACTTTATGCCACATGGAAACTCTTGGGGAACTGGAACATTTACAGGTAAGTATAGTGTAAGATGTGATTTATGAGCTGAGGAAAACTCGTCTCAGACGCATTAAAGGACACTCATCTGACAGCAGGACAGAGATCATGATGTAGTTTGAAGCTCTTATTATAAAGCTCATCTCATGTTTAAGGCCGCTTGGATCCGTCAGCTGCTCACTCTGTGTCCTTCATTAGTTATCAGAGGTGTGTGCAACATCAAAGAACATCGATATAAACCATACCGTCCATCCTGGAGGGGAAACGTGGAGTTTGAACAATCCTAGTGTGAACACAAACCGGTGCAGGAGTGTCAGAACACGTTCCTGCTATCAGAACCTCGAAACATTCAAGTCTGAATGGAAAAGATCATGGAAGCGTCTATTTATTTTGCTATCCTGGAATAAATACTAATAAACAAATATGCAGTACACTGTATTGTATAGTTGCATGATATTATCTGCATTTATCAGTGTTTCCTTCCTTTGTGTTACAAGCTTCCTTCTGAGAAGCACGACTGGAGATGATGCAGTTTGGTTTGTCGTTCTCTTGTAAGACACTGAGAACATTCCTTAAAAACATCTCTTTGTTTTTCAAAGGATAAAAGGGTTTGCAAAGACATGCAGGTGAATAAATGATGACAAATGATTTTCCTTTAAAATCACAGAGTTTTAGGTGAATAATGTGATGAGTGTATGGTCCAGCACTGTCAGGTATGATCTTTCATTCATCTCACCGGCTCTCTTTGTTCTTTTCAGTCTGTCTGTCTCTTTGTTTCTCAGTCTGAACCCCACAGATCTCTCTTTTCTCTATGAAACATTATCCTTTCAATCACACAGCTTTCCATCTCACATGCTGCTGTATGTTTACTTACTGCCTTTGAAGCTTTATTAGCGTGAGAAGAACAGTCGAATGTCAACAGTGCAATCAGTTTACTATCAACGTTAGCCAATATAGACATTAATTAAAATCACCTGGGTCTACAGGTACAAACTCAACAGAACTTGTGTTCGAATGCGCTTCATGTGCAGTTTCATTCATACTGGTTCTCCTTCAAACCGGTTTTCCCTCACATAGCCACACCTTCACTCATCAACAATCACACATCGCCTATAAATGATTATATAAAGTAGTAATTATTAACATTTCTCTAGTTGGAAATTGTTTAAATGTGCTTGAAAAAAATCATGCTATTAGAGCATAAGAACATTTATGAGACAGTTCACGTCAGATTTTGTTGCTGATTTGAAATATGTCGTTTCAACGTGAGTTTAGCAAGCGCTTTTTGAGATTTCAGGATTCCTCCGTTCATGTACAGAGGAGTTGGTCTTGGATGTTGAATCAGCTGTCCGGAGGCGTCACAAATATGACCGCCGAGTGAACAGACTGTCCTCGAAAGGGACTTTGGCTTTACTACACCATGACCTGGATAAAAGCCCAGTTTAACACCTTTCTCCATCACGGCATCATCATCAGCTGATTTACTGCCGTTATGATCAGTGTACATGTGGACCCATTCTGCAGAGTCGACAAGCAAAACTGAGCTTCTGTAAATAATCAAGTAGGTTCACTCAACAAGTGACGATTGACAGAAGCCCCTTTCACAGTCTCTACTGGTAAATTCCCAGTAAATTCCCATTTACAGATCACGTGTGATCAGGGCTTTCCTAAAATATCGGTTCTGTCTATTTCCTGGTATGAGAAGTTGTGCCATCACCAGTATATGATGCTGTGTGTGAACAAAGAACTGGATGACTGGTCATCCCCATACGCCTGTCACGCAGAAGGAAAAACTAATGTTGTCAAATTGGACAGATAGTGAAACTAAAGCACTTCTCATCATCCAGACCAATGAAGAAAACAGTGCAGCGTTTAAAGGTCATTTATTCTGATGACTGACATCACTGGGTTTACCTGTACTGTGGTATTGATGTGTGAATAGGATCTCACCAGTAAAAAGATGCCTAACGCCGTTGCTTGTGTGAACGGCACACTTGAGTATTTATCAGAAAATTCAATCTGGTCATTTTACGGTAATTTTCAGGGTTTATTGTGAGGCTAATTAGTGATGACACTGAGGAGACAAGAAGAGAAACGGCGTTTCAAATTCTAGGATGAGGACGATCATATCTGAGTGACATCTGAAAGACTGAAAAGCCCTGTTCCAGAAAGCATTTGACTGGACAGAGAAGCTGAAGTGCAGAAACACATCATCAGAAGTGGTGATCTATATTTGTGGTAGGATCAATTTTGAATGCATGTATTTTCTAAGTGTGAACTGTGTCATTATTCTGAACACTGGCTCACCCAAAAATAAACATTGTCATTATTTCCTCTCCATCATGTCATTCTTAAATCAGTATGTCTTTCGTTCATCTTCAGAACACAAATGAAGATATTTTGATGAAATCTGGGAGATTTCTGCTCCTCCATTGAAAGTGTTTTCACCTAAAACTCTTCAAAATGTTCATAAAGAGATCATAAAATAAACCCACATGAATTAAGCAGATTAATCCAAGTTGATTGATCACGTTTTCAACATCGCTCAGATGAGGCAGGAGTGACAGGACACACATGTGACAGCAGGGAATGATCCACCTCAACAACAGATTCTTTGAGTTTTTGTGCAAGCGCTTACATGTCTACTACATAATGACACCCCTTTGAGAAAAGTGACCAATGCATCTCGTTTAGACACCGGTCAGCTGTCCACACGTTTGGAAGTGGCTCAGATTGGATGTGACTTTTGCATTTTCTTCTGTTTACACGTGGAACAATTTCCAATCTGTGTCAGATGCGAGTCCAAAGTCTGATTTTTTGATGAGACCAGGATGATGTTGGCGAGCCATCCGTAGACACTCCCACGGGCAGAGCGGCTAAACCAAAGGAATATGCGGCAATCTCCAACATCCAACTGGGACCAGGAACGTCACCGAGTTCAGCTTCTCCTCTTCACCTTTCTCCGTCCTCCACCATTCACTGACCTCAACCCATCGTCTGCTTTCCCATTCACTCCTGTGAATTCTGTCATTACTTCTGCTTACCTTTGTGTCCAATAAAGACAAAAATCCCAGCTAAACTGCAACATCTGAGTCCCCGCCTCATTTTATAGACTGAAACTTGGTCTAACAACAATCAAATAAAGGAAAACTGATGCAGTTCCACAAAGCAAAGGTCAGGACTTTTCAGACACGTATACAACATTCAAATGTTTTGTGAGGTGAACTTAACAGCAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU303866 True 3835 lncRNA 0.41 2 594622 598770

Neighbor

gene id symbol gene type direction distance location
CI01000065_00563411_00579174 MBPB, MBP coding downstream 14539 562848 ~ 580083 (-)
CI01000065_00444905_00447425 NA coding downstream 147197 444680 ~ 447425 (-)
CI01000065_00330696_00340165 NA coding downstream 253850 330592 ~ 340772 (-)
CI01000065_00253168_00255665 NA coding downstream 338912 252691 ~ 255710 (-)
CI01000065_00120723_00133111 MBOAT1 coding downstream 461511 120406 ~ 133111 (-)
CI01000065_00622545_00624625 NA coding upstream 23353 622123 ~ 624657 (-)
CI01000065_00768127_00769942 NA coding upstream 168802 767572 ~ 770151 (-)
CI01000065_00782736_00793467 NT5C3A, NT5C3 coding upstream 183966 782697 ~ 793467 (-)
CI01000065_00843437_00865598 FOXO3, FOXO6 coding upstream 244662 843432 ~ 865598 (-)
CI01000065_00869870_00870423 MED18 coding upstream 269668 868438 ~ 870423 (-)
G267770 NA non-coding downstream 2873 591542 ~ 591749 (-)
G267739 NA non-coding downstream 45143 548000 ~ 549479 (-)
G267728 NA non-coding downstream 69038 524879 ~ 525584 (-)
G267722 NA non-coding downstream 81872 512513 ~ 512750 (-)
G267721 NA non-coding downstream 82454 511694 ~ 512168 (-)
G267778 NA non-coding upstream 31434 630204 ~ 630439 (-)
G267781 NA non-coding upstream 34812 633582 ~ 637869 (-)
G267786 NA non-coding upstream 52779 651549 ~ 651778 (-)
G267788 NA non-coding upstream 56646 655416 ~ 655634 (-)
G267789 NA non-coding upstream 58361 657131 ~ 660848 (-)
CI01000065_00050903_00055774 NA other downstream 540235 50386 ~ 55774 (-)
G267024 NA other downstream 548535 43039 ~ 46087 (-)
G269348 NA other upstream 2709673 3304357 ~ 3312480 (-)
G269679 NA other upstream 3175110 3773880 ~ 3774294 (-)
CI01000065_03794501_03806693 VEGFAA, VEGFA other upstream 3194353 3793123 ~ 3806693 (-)

Expression


Co-expression Network