G267778



Basic Information


Item Value
gene id G267778
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000065
NCBI id null
chromosome length 4956624
location 630204 ~ 630439 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU303873
TTTAAAACTTCTGCACATTCACTCATAAATGAGAAGCTACTGATCAGATACAATATGAGTTTAGTTGAAAAATATTATGACTGTTTTATAAGCTCATGTTCCACCAGGTCCAAACAGACCCGGGAATGCAACAGGTGTATACAGTTGTTTAATGCATTATGAGTGTTTAAATGCATTATAATATTTGCAGATCCCTCGTTACTGCTGAAATTGCTTGTTTGTCGTGTGTTTTAATG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU303873 True 236 lncRNA 0.34 1 630204 630439

Neighbor


gene id symbol gene type direction distance location
CI01000065_00622545_00624625 NA coding downstream 5579 622123 ~ 624657 (-)
CI01000065_00563411_00579174 MBPB, MBP coding downstream 50121 562848 ~ 580083 (-)
CI01000065_00444905_00447425 NA coding downstream 182779 444680 ~ 447425 (-)
CI01000065_00330696_00340165 NA coding downstream 289432 330592 ~ 340772 (-)
CI01000065_00253168_00255665 NA coding downstream 374494 252691 ~ 255710 (-)
CI01000065_00768127_00769942 NA coding upstream 137133 767572 ~ 770151 (-)
CI01000065_00782736_00793467 NT5C3A, NT5C3 coding upstream 152297 782697 ~ 793467 (-)
CI01000065_00843437_00865598 FOXO3, FOXO6 coding upstream 212993 843432 ~ 865598 (-)
CI01000065_00869870_00870423 MED18 coding upstream 237999 868438 ~ 870423 (-)
CI01000065_00906591_00915144 PRDM1, PRDM1A coding upstream 274953 905392 ~ 915144 (-)
G267771 NA non-coding downstream 31434 594622 ~ 598770 (-)
G267770 NA non-coding downstream 38455 591542 ~ 591749 (-)
G267739 NA non-coding downstream 80725 548000 ~ 549479 (-)
G267728 NA non-coding downstream 104620 524879 ~ 525584 (-)
G267722 NA non-coding downstream 117454 512513 ~ 512750 (-)
G267781 NA non-coding upstream 3143 633582 ~ 637869 (-)
G267786 NA non-coding upstream 21110 651549 ~ 651778 (-)
G267788 NA non-coding upstream 24977 655416 ~ 655634 (-)
G267789 NA non-coding upstream 26692 657131 ~ 660848 (-)
G267790 NA non-coding upstream 30832 661271 ~ 661683 (-)
CI01000065_00050903_00055774 NA other downstream 575817 50386 ~ 55774 (-)
G267024 NA other downstream 584117 43039 ~ 46087 (-)
G269348 NA other upstream 2678004 3304357 ~ 3312480 (-)
G269679 NA other upstream 3143441 3773880 ~ 3774294 (-)
CI01000065_03794501_03806693 VEGFAA, VEGFA other upstream 3162684 3793123 ~ 3806693 (-)

Expression



Co-expression Network