G267863


Basic Information

Item Value
gene id G267863
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000065
NCBI id null
chromosome length 4956624
location 877790 ~ 880006 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU303965
AATGTTTCTGTACTCATTTCTGTTTGATACTGTGTATGTGTGTGTGTGTATATATTTATATATTATACACATACACACACACACACAGTGCTTCCCAGCTTCCCACAGGTTTGAAATATACTTGCGGTGGTAGTCGGGTGAAAAATCCTCCTATTACCCACGGCACAAAAAAATGGCCTACTACATGTGACAAACAAATAATGTGTGATTTTTAACAGTATTTTTATTTATTGAAAATAATTTTAATTACATAGCATACTATTACATTTAATTACATACTAATATTATGTATTATTATGCATTGTAAATTATGCAAAATTACAGCATTTAAATTGTTCTCCTTTTCCTATGTTCTCACTTAACTTGTGACTTTAATTATAAACAAGCCTGAAATTCACCGGGACTCTTATTTTGAAATGTCTACACAATTGCGGGCCGATCCTTCAGATTCTTACAATCGTCTAAAACATTTTATATAAAGGCCATAAAGTAGACATTGTCATAATTCATCAACTTGAGTTCATTAGCAATTGCTTGGCATAAATCTGCGCTTTTCATTGATTGAGAATCACTCTGAAGCGCTGTTGTGCGAGCCTGTAGAACGCGCAGCAGCGCCGCCTTGTGACTTTGCAACATGCAGCGCTCTTTGTGAAATATCCACCGCATCTCTGCAGCGCAAGTGGGAATGTCAGCGGGAGTAAACAGTTCTGACGCACACGTAACGAGCAGGTATGAAACACGTAGGGCGAGGGGAGATTTTCCACTAGTTAATCGATCACGGATGGTTTCATTATCTTGGGCGGATACAAAAGTATACGAGGATAAAAATAATAAAAGCATGAATGTGTCTCCAAATATACTTGGGCGGCCGTTAATATACCTGGGTGGCTCGCCCAAGTAAAGTCTATGTGTGGGAAGCACTGTGTGTAATAAATTTTTATATATATATATATATAGTAATAAACAGAAAACACAGTTTTATTTATATAATCAACATTTTTAAATGAATATTTTTATATTTCTCAGTTTTCAGTTCGATCATGTCATTCGTAATACTTCATGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU303965 True 1064 lncRNA 0.36 2 877790 880006

Neighbor

gene id symbol gene type direction distance location
CI01000065_00869870_00870423 MED18 coding downstream 7367 868438 ~ 870423 (-)
CI01000065_00843437_00865598 FOXO3, FOXO6 coding downstream 12192 843432 ~ 865598 (-)
CI01000065_00782736_00793467 NT5C3A, NT5C3 coding downstream 84323 782697 ~ 793467 (-)
CI01000065_00768127_00769942 NA coding downstream 107639 767572 ~ 770151 (-)
CI01000065_00622545_00624625 NA coding downstream 253165 622123 ~ 624657 (-)
CI01000065_00906591_00915144 PRDM1, PRDM1A coding upstream 25386 905392 ~ 915144 (-)
CI01000065_01017206_01031155 NA coding upstream 136690 1016696 ~ 1031678 (-)
CI01000065_01037474_01041412 NA coding upstream 157158 1037164 ~ 1041412 (-)
CI01000065_01103779_01119916 SIM1, SIM1A coding upstream 223538 1103544 ~ 1120757 (-)
CI01000065_01148241_01167007 ASCC3 coding upstream 267868 1147874 ~ 1167007 (-)
G267752 NA non-coding downstream 66475 810762 ~ 811315 (-)
G267853 NA non-coding downstream 78717 798855 ~ 799073 (-)
G267852 NA non-coding downstream 79548 798026 ~ 798242 (-)
G267850 NA non-coding downstream 80823 796256 ~ 796967 (-)
G267791 NA non-coding downstream 210887 666609 ~ 666903 (-)
G267926 NA non-coding upstream 156083 1036089 ~ 1036352 (-)
G267944 NA non-coding upstream 199076 1079082 ~ 1079359 (-)
G267946 NA non-coding upstream 202992 1082998 ~ 1083361 (-)
CI01000065_01173590_01277821 ASCC3 non-coding upstream 305067 1173515 ~ 1277821 (-)
G267997 NA non-coding upstream 451064 1331070 ~ 1331343 (-)
CI01000065_00563411_00579174 MBPB, MBP other downstream 297763 562848 ~ 580083 (-)
CI01000065_00050903_00055774 NA other downstream 823403 50386 ~ 55774 (-)
G267024 NA other downstream 831703 43039 ~ 46087 (-)
G269348 NA other upstream 2428437 3304357 ~ 3312480 (-)
G269679 NA other upstream 2893874 3773880 ~ 3774294 (-)
CI01000065_03794501_03806693 VEGFAA, VEGFA other upstream 2913117 3793123 ~ 3806693 (-)

Expression


Co-expression Network