G267561


Basic Information

Item Value
gene id G267561
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000065
NCBI id null
chromosome length 4956624
location 1123303 ~ 1124325 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU303631
CCTGAAACGTAGCGCAGGGTGTTATATGGGCGAACTCAAAAAGCAAGGTGAAAATCATGATTAAGAGTAAAAAATAAGGCAGAAAGAGTGAACGTCTGAGGCTGGTACTCCATTCCAACCATCTGATCTCTCAGTTGAGTGTTAGATTTGGGTAAATTGGTACATTTGGCATGAACAGCCCATCACCTAAATGTTTAATTGAACAAAACACACCAGGTTTTATAAACTGGCACTCGTACAGTGTAGTTTTTCCTAGAACTTACAAAAAGATTCACCCAACAAATTAACATCCCAAGCCAAAAAAACATGCTGGTTTGGTTTTATCCGAGCGTGAGGTCACTGCCGGCCCGTTCTGCCTGTGCTCTCTGATATTTCACTGTTGACCTGCGCAGCTATGCTGGCCGGGATGATGTTCAGATGGAGGTCGTACTGCTGATCCAGGCCGAGGTAGCTGTCGCTCATCAGGTACAGTGTGTAGATACACCTTCCCGTCTTCTCCGGCGTGTAGAAGGCCACGGACACACTGCTGCGGTTGCGTATGAATCCCACGCGTTTGATAGCCAGCAGTTCTTTTTTCTCAACCTCCCCGAGAACCAGAAACCAGCCTTCGTCTTTAGGTTTGGGAAAGCGCGGCGCCTGTGCCCTGCTGTCCTGCTTCCTCTGAAACCAGTGGAATCATCATGAGTTGAAGGGCTGGGCGATACAGAGAAAAACACTTGTTCTGTGTGTGTGTGTGGTCAGACTCACTCTCTGCTGGCCGGCGTTGAGGCGGCGCAGGGACACCTGTAGGACGTACTCCTGATCGGCGTGCAGCGGCTGCCAGCTGGACTCGTCCCGGATGTTGGTGACGTTAGATGGGAGCATGCGCTCCGTCTGCTCCTCGCAGCCCTCCCACCAGCCCTTCACGCTCAGACTGACCTCCACCACGGGCAGGTGACTCACGTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU303631 True 946 lncRNA 0.51 2 1123303 1124325

Neighbor

gene id symbol gene type direction distance location
CI01000065_01076737_01078446 NA coding upstream 43715 1076737 ~ 1079588 (+)
CI01000065_00873636_00877487 ATG5 coding upstream 245816 873636 ~ 877487 (+)
CI01000065_00800809_00808759 SRI coding upstream 314429 799876 ~ 808874 (+)
CI01000065_00750437_00764088 BMPER coding upstream 359006 750437 ~ 764297 (+)
CI01000065_00633526_00695106 BBS9 coding upstream 428197 633526 ~ 695106 (+)
CI01000065_01452148_01608735 GRIK2 coding downstream 327823 1452148 ~ 1608735 (+)
CI01000065_01867964_01868983 NA coding downstream 743463 1867788 ~ 1869813 (+)
CI01000065_01938179_01949512 NA coding downstream 813760 1938085 ~ 1950751 (+)
CI01000065_02222213_02282352 NA coding downstream 1097704 2222029 ~ 2282432 (+)
CI01000065_02442834_02444552 NA coding downstream 1317334 2441659 ~ 2445951 (+)
G267574 NA non-coding upstream 51249 1071804 ~ 1072054 (+)
G267573 NA non-coding upstream 53085 1069831 ~ 1070218 (+)
G267565 NA non-coding upstream 80433 1042464 ~ 1042870 (+)
G267557 NA non-coding upstream 91527 1017850 ~ 1031776 (+)
G267551 NA non-coding upstream 127130 995882 ~ 996173 (+)
G268021 NA non-coding downstream 242904 1367229 ~ 1416137 (+)
G268022 NA non-coding downstream 248275 1372600 ~ 1423535 (+)
G268017 NA non-coding downstream 251025 1375350 ~ 1400757 (+)
G268016 NA non-coding downstream 280469 1404794 ~ 1412241 (+)
G268083 NA non-coding downstream 574394 1698719 ~ 1699953 (+)
G267577 NA other upstream 40648 1082153 ~ 1082655 (+)
G267432 NA other upstream 340424 782283 ~ 782879 (+)
G266932 NA other upstream 1078637 43038 ~ 44666 (+)
G268525 NA other downstream 1114834 2239159 ~ 2239998 (+)
G268805 NA other downstream 1484582 2608907 ~ 2638205 (+)
G269181 NA other downstream 2334632 3458957 ~ 3462928 (+)
G269225 NA other downstream 2428479 3552804 ~ 3553214 (+)

Expression


Co-expression Network