Gene
RNA
| Item | Value |
|---|---|
| gene id | G268087 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000065 |
| NCBI id | null |
| chromosome length | 4956624 |
| location | 1365976 ~ 1366304 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU304209 | True | 329 | lncRNA | 0.44 | 1 | 1365976 | 1366304 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000065_01297837_01321136 | NA | coding | downstream | 44840 | 1297799 ~ 1321136 (-) |
| CI01000065_01173590_01277821 | ASCC3 | coding | downstream | 88155 | 1173515 ~ 1277821 (-) |
| CI01000065_01148241_01167007 | ASCC3 | coding | downstream | 198969 | 1147874 ~ 1167007 (-) |
| CI01000065_01103779_01119916 | SIM1, SIM1A | coding | downstream | 245219 | 1103544 ~ 1120757 (-) |
| CI01000065_01037474_01041412 | NA | coding | downstream | 324564 | 1037164 ~ 1041412 (-) |
| CI01000065_01373412_01382125 | NA | coding | upstream | 6970 | 1373274 ~ 1382947 (-) |
| CI01000065_01911879_01931555 | HACE1, HACE1.L | coding | upstream | 545208 | 1911512 ~ 1931555 (-) |
| CI01000065_01955024_01969974 | NA | coding | upstream | 586474 | 1952778 ~ 1970223 (-) |
| CI01000065_01982908_01987337 | NA | coding | upstream | 616099 | 1982403 ~ 1987488 (-) |
| CI01000065_02288372_02357728 | GRIK3 | coding | upstream | 922068 | 2288372 ~ 2357728 (-) |
| G267997 | NA | non-coding | downstream | 34633 | 1331070 ~ 1331343 (-) |
| G267946 | NA | non-coding | downstream | 282615 | 1082998 ~ 1083361 (-) |
| G267944 | NA | non-coding | downstream | 286617 | 1079082 ~ 1079359 (-) |
| G267926 | NA | non-coding | downstream | 329624 | 1036089 ~ 1036352 (-) |
| G268095 | NA | non-coding | upstream | 85777 | 1452081 ~ 1463686 (-) |
| G268151 | NA | non-coding | upstream | 237158 | 1603462 ~ 1681220 (-) |
| G268237 | NA | non-coding | upstream | 391310 | 1757614 ~ 1757990 (-) |
| G268252 | NA | non-coding | upstream | 453151 | 1819455 ~ 1819714 (-) |
| G268333 | NA | non-coding | upstream | 502920 | 1869224 ~ 1869484 (-) |
| CI01000065_00782736_00793467 | NT5C3A, NT5C3 | other | downstream | 582315 | 782697 ~ 793467 (-) |
| CI01000065_00622545_00624625 | NA | other | downstream | 741319 | 622123 ~ 624657 (-) |
| CI01000065_00563411_00579174 | MBPB, MBP | other | downstream | 785949 | 562848 ~ 580083 (-) |
| CI01000065_00050903_00055774 | NA | other | downstream | 1311589 | 50386 ~ 55774 (-) |
| G267024 | NA | other | downstream | 1319889 | 43039 ~ 46087 (-) |
| G269348 | NA | other | upstream | 1942139 | 3304357 ~ 3312480 (-) |
| G269679 | NA | other | upstream | 2407576 | 3773880 ~ 3774294 (-) |
| CI01000065_03794501_03806693 | VEGFAA, VEGFA | other | upstream | 2426819 | 3793123 ~ 3806693 (-) |
