G268022


Basic Information

Item Value
gene id G268022
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000065
NCBI id null
chromosome length 4956624
location 1372600 ~ 1423535 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU304139
GTTATATATATATATATATATATATATATATATATATATATATATATATATGGAAAAACATCCATATTTAAAACCTCTGACCCGACACGACGTATTGACAAACACAGGCGTCTAAGAGGATAGAGCAAAACAAAACACCAGTCACAAATTAGAAGTGTAAAACGAGATTTTTAAAATAGAACTGTCGGAGGATTTCAATATAAGAGAAGAGGAGCTTGAGTGTGTTGTCCAGCCCTATTTGTTTGAACCTCGAGAGGCGTCTAAGCTTACGGTACTCCTACATCATGCGTAAGGTCAGAGGTCACTCTTCCACCGGAACTTGACTTGTGTACGGCCATTGCCGGAAGCCAGTGATTATAGTTTATAAAGTTTTAAATATGGATATTTTTCTTACAAAAACCCATCGCTTCACTTCAGAAGGCCTTTATTAACCCCCTGGAGCTGTATGGATTACTTTTATGATGGATGGATGTGCTTTTTTTGGGCTTCAAAATCTCGAGCACCATTTACTACCATTATAAAGCTTGGAAGAGCCAGGATATTTTTTTTAATAAATCTCCAATTGTGTTCGTCTGAAAAAAGATATTCATATACACCTAGGATGGCTTGTGGGTGAGTAAATCATGGGATAATTTTCATTTTTGGGTGAACTATCCCTTTAAATTCATTCCAAATCTGACCCCAAACTTTTAAACTGCAGTGTATCTCAATAACATCACATCACATCACAAAACAATAGTTGCACAGTTTGGCTAACCAAAGTCACTCTACAAATTTGATTACGAGTCCTGAAAATTTAAGGGAGTCAGAATGTGGTGGTCACTCTCGCTTATAACTGAACTATGAACGCAATTATATTTAGCACTTTAAAACGAGACTGATTCTGCAGCTGGGTGAGTGGATGTTTGAGCAAGCTAGTTCAGGTTTTACAGAGAGAGAAGGAGAGATTTTGTGGTTAGGTGGCACATTTGGCACATAACATTTTTCTCTGGTGGTTTCCAGCATTGTAGCTGACATTTAGCTGCTGTTTCCCTTATGAGCTAGTTTTCAGTTTCTACAATTGCTAATATGTTGAGCAAAGACTTTTATACCCTAACAAGCCTAACTTTCTCATTTGTCTTGGCTCCCATCCGTCCTTGTGATCCTTTTCTTTGGGATGAAATGGGGAACAGAGGTTGACGGCTCTGTCTGATGGAGTCCTGAGAGGACCGAAAGACTGCGTGAATGATGACAGTGAAGAGGCTGTTTAAATTTGCTAGAAGGGCCATAATAAATTAGGCACTGGCTCAGCCAGTCAATTACGGCGGTATTCTCAGCCATCCTTGGGCATGAACTTCCCTATTCAAAAGCTCCAAATAAGATTCATTCTCATCTGATCGGATCAGACCATTCTGATATCGCAGACAGTGTTAGTAGGTCAGTTTAAGTTCCCCCAAGATAATGTGTGGTCACAATGTCGATTTTGGGAGTTTGTAGTTTGAGTGCTGTTGTGGATGTTGTGGATGTCTTTAGCTCCCTTTCCCCAGGATATTTCCCAAAATAAGAATGTATGCAGAAATAATGTGTCAGTTGTGGGGTTAACAACATAAAAGATTCAGTAAGACTGAAAGTAAGGTTCTTTAAGTCTTTTTGCATAAAGCTGGACATAATGATGGGTCAATTTGAGCATAAAAGTGAAGATAGTTTGATCAATACTGTGGTGAAGAGATAATTTATCAGATGTATTAAGCTGTTGATTCTATGGACTTTTGCGTAAATGTCTAAATGTTTTGTGGAAACACATTTGTGGTTCATTGCTTGACACAGCAGTAGAAGCATTGAGATAGAAATGGATAACAGCTGATGTGTGGCTAATGCATTGGGCGTGTATTTTCCCCGCTTGAAGCAAGTGCGATTAATCCTCTACGAATGAACCAGAACATGTAGTGTGTCTGCTATTCAGCCAACCCAAGATGGCCCATGTCAAACTTTGTTTTTTCACTCACTGGCTAACAGTCTTCTACAGATTTATATTCCTCCATGTCCTCTGTGATCACTGAGTGAAGAGCACTGGTGGTCCCATCACAACCTTCAAGAAATGGCACACCTCATCCTTAAGAATTAATTTATAACAATAAGCACTTTTTATGGCTATAGACTTCTTTTTATATGGCTAAAGGTGATCTGGAAAGTCATTTGTGGGCTATTTTTGACTGAGGAGTAGCGATAGAACAGGTGGAGTTGAGAATAACAGCAAGTCAGCGGACAGCGTTGGGAGGCCATGCCAGGTCACCTGAAGCTCAAGAAGTGAATCTAATTACCTGTTACCTGCAGCTGTCAATGCTGACGCAACCATGACAGGCCATCATAAGTCCTTGGGAAAAAAAAAGACAAAAATCCTAATGAGGAGTTTGCCATGTGGAGGGTATCCTAACTCCCAACACATATCTAATGTTTGACCATCAATTCCAGCCACTGCTTCGTTTGTTTAAGGGTGAAGGGAGCGCAACAGGTGGAAGTCTGTAGTACCAAGTGGTAAGTCAGCCTTCAAGCTTAATTGTATAATTCCAGACCGAGTGTTCCGCAGCACTGATTTTACTGTGCAGACTCAACATAATTGGTGGTCTGTATAAAACAGATTTGCACTGAAAAGTACAGCCAGACTTAAAACGGAATATAAATGTTAATTTAGTTGGCAGTATCTGTTGGGAAACACCTCTGTATACTTCAAAAGACACCAAAAAACAAACAAACAAATCAAAATTATGTGATTAGAACCAGTGCTATTATTTCAAGTAGGAAACCAGCTGAAAGGTGATGACAAAGTCATGTGCAAATTTGAAGATAGACAGGAAGTGTCAAAAGGAGATGAGGCTGCTTGTAAAGACATCATTATTAGGTTTTGTTACTGGAACAGAATGGTAAAGGGGACAAACAGAGATGTAAAGCAGTAGGGTAAAAGAGTCAGAGGGAAATCAAGTCTCTACAGATGTTGTGTGGCCACCGATAACAACAGATCTAAATTGGAGTGGTGGACAGAGCGGAACTTCAGAGCTCAAGATGATGGAGCCTCTTTAAGATGATGGAGCCTCTTTTTCCGGAAAAACAGCTGGACATGACAAAAAGGCCAAAGACTTTTATCTGCAAATCTATATGACAATATCAATATATGCAATTAAATCAATGCATTAACTGCCAATTAATTTGAGAAAAAAATATTAAGTCCTAGAATACTTCTACTACTTTTTTTTTTTTTTTTTTTCCCATTTGAAAACTTTCCAAAGTGATCATATAATTAACTGCTCTGTTAAGCTTTTCTCACACATGGTTCGATTGCTTGGTTCCACCATGAGCACTAGCAGCAGCTGTTCACCACTGTCACTTGGTAATGACTCAGGAGGGCAAGGCACCAGCTGTTTTACTCAAGTTTTGTCCCTTTAGTTTTACTACAAATCTTTAACATTTGCTTCTGTGCCAAAGCTGCACGTGGGTTTGTCTGCTGTGAATGTCTATTACATATACTGTAGATACTATATATAGATGATTATAGTCCAGTCTCAAAGCTTTGTGTCCTAGCGAAAATTTTAGAAAGTCTTATTAGTGAACAGTTGACCTGTTATTTGAATGTAAACAAAGTCCTATCTAATAATCAATCAGGGTTTCGTAAAAAACAGAGTACCACAACAGCCGCTCTGAAAGTTTTAAATGATATTGTGGAACCTGTGGATAAAGGTGATTATTGCACTTACCTTTTTATTGCTTTATCAAAGGCTTTCGACACAGTGGATCATGAAATATTGCTGCATAGATTAAAGAGTGTTGGTTTATCAAATCATGTTATTTTCTGGTTTAAAAACTATTTAAGTGGAATAACTTAATGTGTACAGGCTGAAAGTAAACCATCTGGGGTGTGTTTCCCGTACAACGATGTAACTCGCTGCTTCACTACCATAGTATGATGCATCATTGAACAAATCAACTAGCTAGTCATGACTGTTTCCCAAAACTGTATTGTCGCAAACTTGTCGTTCAGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU304139 True 4014 lncRNA 0.39 2 1372600 1423535

Neighbor

gene id symbol gene type direction distance location
CI01000065_01076737_01078446 NA coding upstream 293012 1076737 ~ 1079588 (+)
CI01000065_00873636_00877487 ATG5 coding upstream 495113 873636 ~ 877487 (+)
CI01000065_00800809_00808759 SRI coding upstream 563726 799876 ~ 808874 (+)
CI01000065_00750437_00764088 BMPER coding upstream 608303 750437 ~ 764297 (+)
CI01000065_00633526_00695106 BBS9 coding upstream 677494 633526 ~ 695106 (+)
CI01000065_01452148_01608735 GRIK2 coding downstream 28613 1452148 ~ 1608735 (+)
CI01000065_01867964_01868983 NA coding downstream 444253 1867788 ~ 1869813 (+)
CI01000065_01938179_01949512 NA coding downstream 514550 1938085 ~ 1950751 (+)
CI01000065_02222213_02282352 NA coding downstream 798494 2222029 ~ 2282432 (+)
CI01000065_02442834_02444552 NA coding downstream 1018124 2441659 ~ 2445951 (+)
G267561 NA non-coding upstream 248275 1123303 ~ 1124325 (+)
G267574 NA non-coding upstream 300546 1071804 ~ 1072054 (+)
G267573 NA non-coding upstream 302382 1069831 ~ 1070218 (+)
G267565 NA non-coding upstream 329730 1042464 ~ 1042870 (+)
G267557 NA non-coding upstream 340824 1017850 ~ 1031776 (+)
G268083 NA non-coding downstream 275184 1698719 ~ 1699953 (+)
G268222 NA non-coding downstream 352691 1776226 ~ 1779285 (+)
G268256 NA non-coding downstream 407894 1831429 ~ 1831634 (+)
G268274 NA non-coding downstream 532830 1956365 ~ 1960880 (+)
G268270 NA non-coding downstream 548829 1972364 ~ 1974589 (+)
G267577 NA other upstream 289945 1082153 ~ 1082655 (+)
G267432 NA other upstream 589721 782283 ~ 782879 (+)
G266932 NA other upstream 1327934 43038 ~ 44666 (+)
G268525 NA other downstream 815624 2239159 ~ 2239998 (+)
G268805 NA other downstream 1185372 2608907 ~ 2638205 (+)
G269181 NA other downstream 2035422 3458957 ~ 3462928 (+)
G269225 NA other downstream 2129269 3552804 ~ 3553214 (+)

Expression


Co-expression Network