G268274


Basic Information

Item Value
gene id G268274
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000065
NCBI id null
chromosome length 4956624
location 1956365 ~ 1960880 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU304419
TAAAGGCCTACTGTGAAGTGAAGCAATGGGTTTTTGTAAAAAAAAAAAAAAAAAAAAAATCCATATTTATACTTTATAAACTACAATCACTGCCTTCCGGCAGACGGCCGTACACGAGTCTAGTTCTGGGGGAAGAGTGACCTCTGACCCGACGCATGATATACTGACGAACACGAAAGCACAGAGCAAAACAAAACACTGGTCAGGAATTAGAAGTCTAAAACGAGAATTTTTAAATAGAAACGTCAGAGGATTTCAATATAAGAGAAGAGAAGCTTTAGTTCGTTACCCAGCCCTATTAGTTTGAACCTCGAGAGGCGTCTAAGCTTACGATACTCCTACATCATGTGTCGGGTCAGAGGTCACTCTTCCACCGGAAGCCAGTTATTATATTATAAGTTTTTAAATCTGGATATTTTCTTACAAAACCCCATTGCTTCACTTCAGAAGGTCTTTATTAATCCCCTGTAGTCATATGGATTACTTTTAAGATGGATGGATGCACTTTTTTGGGCTCTTTAAAGTCTCGAGCGCTGTTTACTACCATTATAGAGATTGAAAGAGCCAGGATATTTTTTAATATAACTCTGATTGTGTTCGTCTGAAAAAAGATAGTCATATACACTTAGGATGACTTGAGAGGTGAGTAAATCATGGGATAATTTTCATTTTTAGGTGAAATATCCCTTTAAACTTCTAGAACTTTTTTACCCTTTCATTTTTTGAAGTACAATAGGTCTGTGTTCCAAAGCAAACCTTAATTACAACCATTTAAGTTTGGATTTTCACATCAATGCTCAAAGAGGGCATGACAGTTAACAGGTTAATTAGTCAAATTATAAATTATACTCAGTTGATCATACATACCTGCAGTGAGTCAATGGTGGTCCACTTCTTAATACTGCTGTTGGCAGGATCGGGAATTATAGGCCACAAAAACATCTTCACCCTATGACAACCAGACATTAGTAAGTTATATTACTAGTACACTGTAAAAAGGATTTCTAGAAGTTGTAAATAAAGATTATTGGAGTATGTTTTACAAGAAAATACTCTTTCAGTCTTTCTACTTCAAAATGCCACATTATTTCAGTGTATTACTTGGTTACTTGCAGTTATTTTTTTTTTTTTTCAGTGTACTGGCCTCGCACAATAATAACGAGGCTGTGGATGCTCACCGTTCATGTTTCCCCAAACAGGTAAACACAACAATGATGATGAGAAGTGATAACCCAATGCATGCTGGGATAACAAAGAGCACCATTCCAATTCCATCTGAAAAACATTTTCAATAATCAGTCAAACCAATAATGAAAATATTTTAAAATCAACATGCCAGGTGTCGTTAAGGAGAGCATTCATATTACACTCATGCATGACTAAATGTACTTAGTGATTATGGTTTGTAAAAGTTATTATTGAAATCTTATATGGCATTTACATATTACTATCATCTGTCTCATCAAACATAATCAGATATGTGTGTGCACAAATGTTCAAAAGTTTGGCTCGGTAAGATTTTTGAGTTTTGCTCACCAAGGCTGCATTTATTTGTGCAAAAATACAGTAAAAATTGTAATAGTATGAGATATTATTACAATTTAAAATAACTGTTTTCTATTTGAATAGATTTTACAAAGTAATTTATTTCTGTGATTCAAAGCTGAATTTTCAGCATCATTACTCCAGTCTTCAGTGTCACATGATCCTTCAGAAATCATTGTAATATGATGATTTGATGCTCAAGAAACATTTATGATTCGTTAATGAATAGAAAGTTTAAAAGAAAAGCATTTATTTGAACCCAGATACTCTCTCTCACACACACACATGCACACACACAAACATACACACACACAATATATATATATATATATATATTATACAGTATATATTATTGAACAGTATGGCCATAAATATTCACCAATACTTCCAGTTGTCAGGTACTGAACTGATCCGTTAAAACTTCCACCCATTGTATGAACCTCTACAAAGGCAGAATATATGGTAAACGGCTGAAGATCTTTCACCACAGCGCTGGTCTTGTTAGTATTTATAACTTGAAAAGGGATAGAAACATTGTGGTTAATAAAATAACTATTCAAAAATCTGCTACCATCCAAAAATCTGCTATCAACTTCTTTAAATCCTTGAATACCTTGGATATCATCCGTATCATTCCAAAAGTAAATAGTATATCCTTGAATGATCCCATTTGTCTCATTAAGGGGAATTTTATCCCAGCGAAGATTCACCTGTGAATAACGGATTTCCACAGTTTCTAACTTTGGTGCCGCAGAGGGTGCTGTGAGAAAATATGAAACATTTGTCAGCATTCTAGAATTATACATCTAGCAAAATCTGAGCCCACTAGATGGAAGCATTGTATCATTATCCAGCTTTGCTTTATTACACATCACTTCGCCAGTTTATAGAAAGCCCTCAGATATCCACTACTTTCATGCACTACACACCTTTCTGACGGCTGTATGCCATTAAGGTAAGAGGACGTCCAACCCCGTTAACATATTTGGGATAAACGGAGATCTCATATGGCATGAAAGCCTTTAACCCTGTTACTATGGTACTGGAGCTGTTTTTGTCCAACAGAATGAAGGACAGAGGAGCTGCCGGCATCTCACACAGAGATCTCCACTCCAGCACGTATTCCCTGACTCTGGAGGACACCGGGCTTTCCCACGTCAGGAGCACAGACGTCTCTGACTGGGGATGCACATTGAAATTAGACACAGGGTCCAGCCCTCTTCCGATACACTGGTACTTCATTAGGATTCGAGCTCCCCTTTGCATTAGTGGCTATCAGGTAGACCTTTTTAATCCACTTGGTGAGACTGAAAAAGCAGTGGCTTTCTTGAGTTACACACAAAGTCTTTTTAGGTTCCTTTGATTCAACAGTGTATGTCAAGTTCCAGCCATTGGCACGAAATTTTTGTGAGGGCTAAAATGAGATGAGGCAGTGGTTAAAGGGAAGTTTCAGGTTTAATACA
>TU304417
ACTTCTGACTGGTTGTTTATATATAATTATTGATTTTCTGATTTATAATAATAATAAATACCTGTTACTATGGTACTGGAGCTGTTTTTGTCCAACAGAATGAAGGACAGAGGAGCTGCCGGCATCTCACACAGAGATCTCCACTCCAGCACGTATTCCCTGACTCTGGAGGACACCGGGCTTTCCCACGTCAGGAGCACAGACGTCTCTGACTGGGGATGCACATTGAAATTAGACACAGGGTCCAGCCCTTCTTCCGATACACTGGTACTTCATTAGGATTCGAGCTCCCCTTTGCATTAGTGGCTATCAGGTAGACCTTTTTAATCCACTTGGTGAGACTGAAAAAGCAGTGGCTTTCTTGAGTTACACACAAAGTCTTTTTAGGTTCCTTTGATTCAACAGTGTATGTCAAGTTCCAGCCATTGGCACGAAATTTTTGTGAGGGCTAAAATGAGATGAGGCAGTGGTTAAAGGGAAGTTTCAGGTTTAATACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU304419 False 3008 lncRNA 0.37 3 1956365 1960880
TU304417 True 497 lncRNA 0.43 2 1960295 1960880

Neighbor

gene id symbol gene type direction distance location
CI01000065_01938179_01949512 NA coding upstream 5614 1938085 ~ 1950751 (+)
CI01000065_01867964_01868983 NA coding upstream 86552 1867788 ~ 1869813 (+)
CI01000065_01452148_01608735 GRIK2 coding upstream 347630 1452148 ~ 1608735 (+)
CI01000065_01076737_01078446 NA coding upstream 876777 1076737 ~ 1079588 (+)
CI01000065_00873636_00877487 ATG5 coding upstream 1078878 873636 ~ 877487 (+)
CI01000065_02222213_02282352 NA coding downstream 261149 2222029 ~ 2282432 (+)
CI01000065_02442834_02444552 NA coding downstream 480779 2441659 ~ 2445951 (+)
CI01000065_02562189_02562709 NA coding downstream 601309 2562189 ~ 2562738 (+)
CI01000065_02714893_02755256 NA coding downstream 752561 2713441 ~ 2755370 (+)
CI01000065_02770419_02775297 NA coding downstream 809169 2770049 ~ 2776165 (+)
G268256 NA non-coding upstream 124731 1831429 ~ 1831634 (+)
G268222 NA non-coding upstream 177080 1776226 ~ 1779285 (+)
G268083 NA non-coding upstream 256412 1698719 ~ 1699953 (+)
G268022 NA non-coding upstream 532830 1372600 ~ 1423535 (+)
G268270 NA non-coding downstream 11484 1972364 ~ 1974589 (+)
G268301 NA non-coding downstream 14631 1975511 ~ 1982735 (+)
G268361 NA non-coding downstream 40191 2001071 ~ 2001301 (+)
G268367 NA non-coding downstream 46160 2007040 ~ 2007290 (+)
G268374 NA non-coding downstream 51659 2012539 ~ 2012950 (+)
G267577 NA other upstream 873710 1082153 ~ 1082655 (+)
G267432 NA other upstream 1173486 782283 ~ 782879 (+)
G266932 NA other upstream 1911699 43038 ~ 44666 (+)
G268525 NA other downstream 278279 2239159 ~ 2239998 (+)
G268805 NA other downstream 648027 2608907 ~ 2638205 (+)
G269181 NA other downstream 1498077 3458957 ~ 3462928 (+)
G269225 NA other downstream 1591924 3552804 ~ 3553214 (+)

Expression


Co-expression Network