Gene
RNA
| Item | Value |
|---|---|
| gene id | G268470 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000065 |
| NCBI id | null |
| chromosome length | 4956624 |
| location | 2088355 ~ 2088746 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC107710542 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU304620 | True | 392 | lncRNA | 0.47 | 1 | 2088355 | 2088746 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000065_01982908_01987337 | NA | coding | downstream | 100867 | 1982403 ~ 1987488 (-) |
| CI01000065_01955024_01969974 | NA | coding | downstream | 118132 | 1952778 ~ 1970223 (-) |
| CI01000065_01911879_01931555 | HACE1, HACE1.L | coding | downstream | 156800 | 1911512 ~ 1931555 (-) |
| CI01000065_01373412_01382125 | NA | coding | downstream | 705408 | 1373274 ~ 1382947 (-) |
| CI01000065_01297837_01321136 | NA | coding | downstream | 767219 | 1297799 ~ 1321136 (-) |
| CI01000065_02288372_02357728 | GRIK3 | coding | upstream | 199626 | 2288372 ~ 2357728 (-) |
| CI01000065_02358877_02366169 | NA | coding | upstream | 270107 | 2358853 ~ 2366169 (-) |
| CI01000065_02679973_02700843 | NA | coding | upstream | 591093 | 2679839 ~ 2701444 (-) |
| CI01000065_02820772_02829132 | NA | coding | upstream | 730966 | 2819712 ~ 2829132 (-) |
| CI01000065_02940142_02940429 | NA | coding | upstream | 851308 | 2940054 ~ 2940813 (-) |
| G268460 | NA | non-coding | downstream | 8325 | 2079043 ~ 2080030 (-) |
| G268438 | NA | non-coding | downstream | 14648 | 2073485 ~ 2073707 (-) |
| G268327 | NA | non-coding | downstream | 126580 | 1877092 ~ 1961775 (-) |
| G268333 | NA | non-coding | downstream | 218871 | 1869224 ~ 1869484 (-) |
| G268471 | NA | non-coding | upstream | 1042 | 2089788 ~ 2090019 (-) |
| G268680 | NA | non-coding | upstream | 138695 | 2227441 ~ 2227694 (-) |
| G268684 | NA | non-coding | upstream | 146307 | 2235053 ~ 2235271 (-) |
| G268679 | NA | non-coding | upstream | 150394 | 2239140 ~ 2239984 (-) |
| G268687 | NA | non-coding | upstream | 152384 | 2241130 ~ 2243425 (-) |
| CI01000065_00782736_00793467 | NT5C3A, NT5C3 | other | downstream | 1304694 | 782697 ~ 793467 (-) |
| CI01000065_00622545_00624625 | NA | other | downstream | 1463698 | 622123 ~ 624657 (-) |
| CI01000065_00563411_00579174 | MBPB, MBP | other | downstream | 1508328 | 562848 ~ 580083 (-) |
| CI01000065_00050903_00055774 | NA | other | downstream | 2033968 | 50386 ~ 55774 (-) |
| G267024 | NA | other | downstream | 2042268 | 43039 ~ 46087 (-) |
| G269348 | NA | other | upstream | 1219697 | 3304357 ~ 3312480 (-) |
| G269679 | NA | other | upstream | 1685134 | 3773880 ~ 3774294 (-) |
| CI01000065_03794501_03806693 | VEGFAA, VEGFA | other | upstream | 1704377 | 3793123 ~ 3806693 (-) |
