G268680



Basic Information


Item Value
gene id G268680
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000065
NCBI id null
chromosome length 4956624
location 2227441 ~ 2227694 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU304855
AAAAAATTGCAAAAGGGGTCTGAAAAGGCGCTAAGTTGGCAACACTGATGCAGCCTTCCGTCTCCAGGTCACAGCCCGCCGCTGTCCAAACCGGCGTTACGGCAATTTTGCACTGGCCGGAGGCAATTACCAAACTGGCTCTGTGTGCGTATCACACCAATGTACATATTTTGCGACAGCAAATCAAAGTTATTAATTATTTAGGCTTTATTCAAAATTAACTGGTAGTATTAATTTTCTTCAAAGCTAAAAAT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU304855 True 254 lncRNA 0.42 1 2227441 2227694

Neighbor


gene id symbol gene type direction distance location
CI01000065_01982908_01987337 NA coding downstream 239953 1982403 ~ 1987488 (-)
CI01000065_01955024_01969974 NA coding downstream 257218 1952778 ~ 1970223 (-)
CI01000065_01911879_01931555 HACE1, HACE1.L coding downstream 295886 1911512 ~ 1931555 (-)
CI01000065_01373412_01382125 NA coding downstream 844494 1373274 ~ 1382947 (-)
CI01000065_01297837_01321136 NA coding downstream 906305 1297799 ~ 1321136 (-)
CI01000065_02288372_02357728 GRIK3 coding upstream 60678 2288372 ~ 2357728 (-)
CI01000065_02358877_02366169 NA coding upstream 131159 2358853 ~ 2366169 (-)
CI01000065_02679973_02700843 NA coding upstream 452145 2679839 ~ 2701444 (-)
CI01000065_02820772_02829132 NA coding upstream 592018 2819712 ~ 2829132 (-)
CI01000065_02940142_02940429 NA coding upstream 712360 2940054 ~ 2940813 (-)
G268471 NA non-coding downstream 137422 2089788 ~ 2090019 (-)
G268470 NA non-coding downstream 138695 2088355 ~ 2088746 (-)
G268460 NA non-coding downstream 147411 2079043 ~ 2080030 (-)
G268438 NA non-coding downstream 153734 2073485 ~ 2073707 (-)
G268684 NA non-coding upstream 7359 2235053 ~ 2235271 (-)
G268679 NA non-coding upstream 11446 2239140 ~ 2239984 (-)
G268687 NA non-coding upstream 13436 2241130 ~ 2243425 (-)
G268701 NA non-coding upstream 32798 2260492 ~ 2260808 (-)
CI01000065_00782736_00793467 NT5C3A, NT5C3 other downstream 1443780 782697 ~ 793467 (-)
CI01000065_00622545_00624625 NA other downstream 1602784 622123 ~ 624657 (-)
CI01000065_00563411_00579174 MBPB, MBP other downstream 1647414 562848 ~ 580083 (-)
CI01000065_00050903_00055774 NA other downstream 2173054 50386 ~ 55774 (-)
G267024 NA other downstream 2181354 43039 ~ 46087 (-)
G269348 NA other upstream 1080749 3304357 ~ 3312480 (-)
G269679 NA other upstream 1546186 3773880 ~ 3774294 (-)
CI01000065_03794501_03806693 VEGFAA, VEGFA other upstream 1565429 3793123 ~ 3806693 (-)

Expression



Co-expression Network