G268603


Basic Information

Item Value
gene id G268603
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000065
NCBI id null
chromosome length 4956624
location 2464783 ~ 2530305 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU304760
TGTACTGCAGAAGTTCAGAAAAATGTGGTATCTGTGACGTCCTCAAACATCTTCTTTCTTTGCATCTGTTAAGCTCAATGTTTGCTTCCACCACGCAGTGAGTTGTTTCCCTGCTTCTTCATGTTCGTCATCAATCAACTGTATGGAATGAAGGCAGACAGCAACAGCGCTTGGGATCGCATCCAGGGTCACTGCCCTTCTAACAGCTGGGATTCGGATGCCCTTCTCATGAGTACAACAGCTCTGGCGAGGGCACGACTGCGGCCGCGGCTACTGGGCTCGCTTCAACTAAAAGATAAATGACAATAGACAATGGAGCCTGTCATTTCTCAGGTTAAAGGCTTTTTGCTGAAGTAAACAGTCTCAGCTGGTTGTCAGTGGTAGTTACACAGCCATTCAAAGAAAGTGTAAACAGAACAAAAGCTCAGATGAGGTTAAACTGATATTTATGTCCCATTGAATCTTTTTTGGTTGAATTTCTCTGGCCCTCCCTGATCCCCAAACACTCTTTTAATGTTATAACAGCGTTTTAGTTTGTTCGTGGATGATTTTGGAAGTCAAGCAATCGACAGAAATGTCCAAATATCTGTGTCTGTGATTAGGCATTGTGCTCTAATCTATTAATAATTCAACCTCATCCAGCTTAGACACTTCAAAAAGAATATAATCAATCACATGAAGGAGAAAATAAAGGCCTG
>TU304761
TGTACTGCAGAAGTTCAGAAAAATGTGGTATCTGTGACGTCCTCAAACATCTTCTTTCTTTGCATCTGTTAAGCTCAATGTTTGCTTCCACCACGCAGTGAGTTGTTTCCCTGCTTCTTCATGTTCGTCATCAATCAACTGTATGGAATGAAGGACTTGTACCCGAGTGCTTCACATCACAGTGCTGTATCAGGAATAAATCTGCTGAGAGGTGCTGAGATGGAGACAAGGTTGGTGTAAGAGACTATGGACCGTCCCCAACAGGAGAAAAGGAGCAAGAGAGAGAGTGAAAGTGAAATAAGAGAAAACAGGCAGACAGCAACAGCGCTTGGGATCGCATCCAGGGTCACTGCCCTTCTAACAGCTGGGATTCGGATGCCCTTCTCATGAGTACAACAGCTCTGGCGAGGGCACGACTGCGGCCGCGGCTACTGGGCTCGCTTCAACTAAAAGATAAATGACAATAGACAATGGAGCCTGTCATTTCTCAGGTTAAAGGCTTTTTGCTGAAGTAAACAGTCTCAGCTGGTTGTCAGTGGTAGTTACACAGCCATTCAAAGAAAGTGTAAACAGAACAAAAGCTCAGATGAGGTTAAACTGATATTTATGTCCCATTGAATCTTTTTTGGTTGAATTTCTCTGGCCCTCCCTGATCCCCAAACACTCTTTTAATGTTATAACAGCGTTTTAGTTTGTTCGTGGATGATTTTGGAAGTCAAGCAATCGACAGAAATGTCCAAATATCTGTGTCTGTGATTAGGCATTGTGCTCTAATCTATTAATAATTCAACCTCATCCAGCTTAGACACTTCAAAAAGAATATAATCAATCACATGAAGGAGAAAATAAAGGCCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU304760 False 698 lncRNA 0.42 3 2464783 2530305
TU304761 True 856 lncRNA 0.43 5 2464783 2530305

Neighbor

gene id symbol gene type direction distance location
CI01000065_02442834_02444552 NA coding upstream 18832 2441659 ~ 2445951 (+)
CI01000065_02222213_02282352 NA coding upstream 182351 2222029 ~ 2282432 (+)
CI01000065_01938179_01949512 NA coding upstream 514032 1938085 ~ 1950751 (+)
CI01000065_01867964_01868983 NA coding upstream 594970 1867788 ~ 1869813 (+)
CI01000065_01452148_01608735 GRIK2 coding upstream 856048 1452148 ~ 1608735 (+)
CI01000065_02562189_02562709 NA coding downstream 31884 2562189 ~ 2562738 (+)
CI01000065_02714893_02755256 NA coding downstream 183136 2713441 ~ 2755370 (+)
CI01000065_02770419_02775297 NA coding downstream 239744 2770049 ~ 2776165 (+)
CI01000065_02783579_02788578 NA coding downstream 253010 2783315 ~ 2788866 (+)
CI01000065_02806198_02813320 NA coding downstream 275893 2806198 ~ 2813722 (+)
G268576 NA non-coding upstream 67076 2397197 ~ 2397707 (+)
G268502 NA non-coding upstream 313835 2150748 ~ 2150948 (+)
G268472 NA non-coding upstream 373673 2090845 ~ 2091110 (+)
G268469 NA non-coding upstream 374793 2089448 ~ 2089990 (+)
G268468 NA non-coding upstream 375388 2089035 ~ 2089395 (+)
G268635 NA non-coding downstream 6839 2537144 ~ 2537375 (+)
G268638 NA non-coding downstream 8685 2538990 ~ 2539204 (+)
G268641 NA non-coding downstream 15092 2545397 ~ 2545668 (+)
G268647 NA non-coding downstream 33106 2563411 ~ 2563637 (+)
G268786 NA non-coding downstream 57122 2587427 ~ 2587726 (+)
G268525 NA other upstream 224785 2239159 ~ 2239998 (+)
G267577 NA other upstream 1382128 1082153 ~ 1082655 (+)
G267432 NA other upstream 1681904 782283 ~ 782879 (+)
G266932 NA other upstream 2420117 43038 ~ 44666 (+)
G268805 NA other downstream 78602 2608907 ~ 2638205 (+)
G269181 NA other downstream 928652 3458957 ~ 3462928 (+)
G269225 NA other downstream 1022499 3552804 ~ 3553214 (+)

Expression


Co-expression Network