XLOC_010410 (CR848788.1)


Basic Information

Item Value
gene id XLOC_010410
gene name CR848788.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 5607138 ~ 5612480 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00020467
CTGTGTATTTCTTGTTTCTGGTCTATCGTTCCGGTAGAGAGCGAGTGCTGGAGGATGGCAAGGCGGATAGACTCCAAGGCGGTTGGCAACAACTGGAATGTGAGTGGACAGGAGAATGCAGACGGAAGTGACGAATCAGGAAATGAAGTAGGAGATATGGAAGTAGTTTGCGGGAACTATGAAAAATGGGACATGGTTAAAAACAACAAACGGAAAAAGAAACGAAGAAATAAATCTGATGAAAGTGATTCGGATAGATGCTCAGCCCTAGAGGAAACGGTGACAGTGGAATACAAGGTATTTGCTAAACCTGTGCAAGAAGGGGATACATTTGGAGGTATGAATCCGATACAACTAACCAAAACACTGCATAAGGAAATAGGTATAATAAAGAGTGCAAAAATCTTGAGAAACGGATCGATACTGATTTTCTGTAAAGATGAAAAACAGCAAGCTAAAGCAATTAAGGTGAATAAAATCAATGGAAAAAAAGTAGAATGTTCCAAGACAAACGGGAAAAGATATGTTAAAGGCGTTGTGACAGGAATTCCTGTCAATGTTTCGGCAGATGAAGTGAAAGCAAGCATAACAAATGCAAATGTGGTCGAAGCTAAACGCTTAAGAACAAACAGAAATGGAAGTGCTTGTGATAGTCTTTCTGTTATGGTCACATTTGATGAGGAGACACTCCCGAAAAAGATATTAATCGGGTATATGTGCTATGATGTAAGACTGTACATTCCCCCGCCCCTTCGGTGTTATAAATGTCAGAGATTTGGACATATAGCAGCTTTTTGCAAGGGAAAGCAAAGGTGTGGTAAATGTAGTGGGGAACACGAATATGGAAAATGTGAAGAGGGTGCAAAGTTGAAATGTTGCAACTGTGGAGGGGATCATAGCTCAGCGTATCGAGGGTGTGAGGTTAGCAAAAGGCAGGCAGAAGTACAAAGAGTAAAAGCTGTTCAAGGAATCAGCTATGCGGAAGCATTAAAAAAGGTTCCAGAAATTATGACTGTgtctaaacaaaatgaaaacaggaacaaaaatgcAGAGACATGTCAAAAATGTGAACAACTGAAAGCGGAAACTCTGATAGTGAGCAAAAATGATTTTGTAATATTCATGGCAGAGATAATAAATTGTTCCGCTCAAACGAAAAGTAGAAATGAAAgaatcaaaataataatcaaatcagcAGAAAAATACCTGGATGTGAAGGATCTGCTCTGGGAAACGGTTAGGGACATCTTAAATGAAGATACACAATCATCCCAGCCTGGGGGTGGAACGTCTTAAATGTTAAACGTTCTACAATGGAATGCAAGAAGCTTAATTGCAAATGGccaagaatttaaaaaatatattgataatattataGAGAAACCTAATATAATATGCATACAAGAAACATGGTTAAAACCtcaattagattttaatattaaggGATATAATATAGTTAGAAATGATAGGAATCATAGCAGAGGAGGAGGAATTGCAACATTTATAAAAAGCGGAATGAAGTTTAGGAtagaacaaataaatacaaagtatGAATCAATTTTAATCAAGGTATGGACGGATAGAGGATGTATagacattattaattattataatccctgtgataaattaaatcaaaacataTTAGAAGAAGTAATGGGTGTACGACAAGACAGTGTTTTATGGTGTGGGGATTTTAATTCACATAATTCATTATGGGGGAGTAATAGTAATGATGCAAATGGGATTCTTCTTGAAGAATTTATAgatgaaaaatatttagtttgtcTAAATAATGGTGAAGGCACACggtataattgttttaaaaatacagaaagcatACTAGACTTAACATTTATTAGTAGTTCATTAGCAGCAGTTAGCACATGGAAAGTACTCAAGCACAATACAATAGGTAGTGACCATTACCCAGTAGTAACTAAAATTGGATTAAAGATAATGTATGAAAAAGAAGATAGAATTCCAAGATGGAAATTGGAGAAAGCAAATTGGAAAGAATTTCAAGAATTATGTGATAAGAGAGTTAtgacaatacaaataataaaccagagagatgtaaacattttaaataataaaattgttaatGAAATAATTCAAGCAGCCGAAGAAATAATACCTAAAAGTAAAGGAGTTGGTTGTACTAAAAATGTACCTTGGTGGAATAATGATTGTAAAGCAGCTATTAAAGCAAGAAATAAAGCATTTAGACATCTTAAAAAACACCATTCACTGGAAGCTATGATCATGTATAAAAAGGCTCAGACAATGTTAAGAAAAactattaaaacacaaaagcGTATATTCTGGAGAGAATATTGCAATAGTCTTGGACGAGAGGTACAATTATCAGAGGTGTGGGGTATGATTAGAAGAATGGCAGGTGTTAGACGAAATTATGAATTACCAGTGTTACAGTATGGCGATATAGTAGCGATCAGCAACCTAGAAAAGGCGGAACTATTAGTCCAACATTTTAGAAATGTACATAGTTCAGATAATCTCTCTGAAGAGGCTAGGAAATGCAGAAATACTACATTAACTAAACATCCTGATCTtttaaagaaagtaaaaacaacagaaaatccTTTAGATTTACAATTTAATATGTTTGAATTAAAACGAGCAATCATTAGCGCAAGACAAACTGCCCCAGGTAAGGATGAAATATGCTATAAAATGTTGTCACACATGTCAGAGGCATCACTAGAAATAGtactaaatttatttaatcaaatttggGATATGGGTCAATTACCTATAGCATGGAAACAATCTATAGTAGTACCTATACTTAAACCAGGGAAAAATCCATCAGATCCTTCTAGCTATAGACCCATTTCACTGACATCCCACTTATGCAAAATAATGGAAAGAATGATTACAGAAagaattacatattttttagaAAGCAAAAACCTTTTTTCTCCATATCAGAGTGGGTTCCGCAGAGGCAGAAATACTATGGACTCAGTATTATGTTTGGAATCAGACATCAGGAAAGCACAGACTAACAAAGAAGTTGTGATAGCTATCTTTTTTGATATAGAAAAGGCATACGATATGCTTTGGAAAGAGGGACTGCTGATTAAATTAAAATCTTTAGGAGTCACTGGCAAAACGTATAATTGGGTCATGGATTTCTTATTTGGAAGAAAAATACAAGTTAGGGTAGGAAAAGAATATTCACATGAATACACAGTGGAAAATGGAACTCCTCAAGGTAGTGTTTGCAGCCCATTATTGTTCAATATAATGATAAACGACATTTTCTCTCAGATTGAACAAAGTATAGGAAAATCATTGTATGCAGATGATGGGGCACTATGGATTAGAGGTCGGAATGTGTCATTTGtacaaaagaaaatacagaatGCAATATTTGAGGTAGAAAAATGGGCAAATAAATGGGGATTCAAACTATCTGTTGCAAAAACTCAGGTCATCTGTTTCTCAAGACGGCATAAAACCACATCACTCGCTTTAAAACTATATGGACAACCACTAGAACAAGTAAAAACTGTAAGGTTTCTTGGGGTTTGGTTCGATGAAAAGCTGACATGGAAGGATCATCTGaataaaatcacagaaaaaagtaaaaaggTTGTTAATGTACTTCGTTGCCTGTCAGGGCAAGAGTGGGGAGCGAGTAGAACATCACTACAAAATATATACTGGGCCCTCATGAGATCTGTTTTTGATTATGGATGTATAGCTTACATGTCGGCAGCAGAGTCAAACCTCAAAAAATTAGATGTATTACAAGCACAGGCCCTTAGAATCTGTAGTGGATCATTTAGAACCTCACCAGTTTCATCTATGCAGGTTGAAATGGGAGAAATGCCCTTAAGCATTAGGAGAATGAAATTAATGATGGCATATTGGGTTAACATTCAGGGACAAATTGAATCACATCCAACAAAAAGAACATTACTAGAATGTTGGGAGCATGAGGAAACTAATTTCATAAGTTTCGGATGGATAGCTGAGGCAAAAGCCAGAATAATTGGATTAGATCAACTGCAATACTGTAAGGCAGTCCCAATCCCATATATTCCGCCATGGTTTTTTCCATTACCTAAAGTAGATTTCAATATACAACAGGAGTTAAAAGATAACAATAATATTCTTCCAACAAAATATATAGTGCagaattatttagaaaaaaattataaagaatcaatatttttattcacAGATGGATCTAAAGACCTACAAACAGGCCATACAGGCGCAGCAGTGTATATCCCAGTTAATCAATACCATATTAAGAAAAGAATAACTAATAATATATCAGTATATACAACAGAGTTAATTGCAATACTAATTGCCCTGCAGTGGATTGAGGAGAATGACATATATAATGTAGTAATTGCATCAGATAGCTTTTCATCACTGGAAAGTATAAGATCTGGAAGGTCTTCATACAGAATggatattcttaataatatactCAGTAAgacatattatattaaaatgaaggGCAAATCAATATATTTCATTTGGGTTCCTGCTCACGTAGGTGTGGAAGGTAATGAGAAGGCAGACTTTCTGGCCAAACAAGCTCTCAGAATTAGTAAAGTAAATCTAGAAGTCCCATTGAGCAAAGCAGAAGCTAAAATCATGATAAGAACATATGCACAATCAATATGGCAAGTACACTGGGATAACATTGATACAGGTAgacatttatataatatacagAAACAAGTTGGAACTGGGAGGAAGGAGAACAGAAATCGTAGGGAAGGAAGTATTATAACTCGGATGAGAATAGGTCACACTGGACTCAATCATACATTACATAAAATAGGGAAACACCCAACTGGGCAATGTATACATTGTAATCAACAAGAAACAATAGAACATATTTTATTTCACTgtagtaaatataataaagaacGAAACAATCTTATTCAGTCAGTTAAAAAGAGCAATCTTCAGCATTTTACATTGGCAGGTTTATTAGGAAACAAATCTAGTGAggtatataatgatataataaaatttattaaagaaACCCAGTTAGAGGAAAGAATATAGAGATAATATCAGAAGAATTGTTAGTCCACcccatttttattacattttattactattataaaggttttttttttttttttttttctttttttttttctttcctctctcCCCCTCCCCTCACAATTTCCTCCCCCTTTCTCTCCCTTCATGTAATTTATACACTTCAGAAAGTATTCAACTAGTTCCATACTCCATTCCAgtcggtggcggtaatgcacctatAAGTCTGGTTGCCAACCGCCAGTAAaacccaaagaagaagaagaagaagaagaagatttcTTG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000103037

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00020467 True 5343 mRNA 0.35 1 5607138 5612480

Neighbor

gene id symbol gene type direction distance location
XLOC_010409 NA coding downstream 18518 5453180 ~ 5588620 (-)
XLOC_010408 NA coding downstream 433695 5169775 ~ 5173443 (-)
XLOC_010407 dctn3 coding downstream 453106 5145132 ~ 5154032 (-)
XLOC_010406 ttk coding downstream 463962 5110455 ~ 5143176 (-)
XLOC_010405 CU694364.1 coding downstream 499721 5107298 ~ 5107417 (-)
XLOC_010411 NA coding upstream 23806 5636286 ~ 5643738 (-)
XLOC_010412 si:dkey-283b15.2 coding upstream 38015 5650495 ~ 5671862 (-)
XLOC_010413 ndufa3 coding upstream 105280 5717760 ~ 5721386 (-)
XLOC_010414 NA coding upstream 133828 5746308 ~ 5786042 (-)
XLOC_010415 trak1a coding upstream 174290 5786770 ~ 5873866 (-)
XLOC_010626 CR392024.2 misc upstream 15282632 20895112 ~ 20895175 (-)
XLOC_010404 LO018201.1 non-coding downstream 545509 5061499 ~ 5061629 (-)
XLOC_010399 NA non-coding downstream 911515 4685663 ~ 4695623 (-)
XLOC_010416 BX957314.1 non-coding upstream 258093 5870573 ~ 5870689 (-)
XLOC_010418 NA non-coding upstream 635543 6248023 ~ 6249246 (-)
XLOC_010419 NA non-coding upstream 678693 6291173 ~ 6351690 (-)

Expression


Co-expression Network