G269424


Basic Information

Item Value
gene id G269424
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000065
NCBI id null
chromosome length 4956624
location 3351600 ~ 3352903 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU305744
CTTTATTCTCTTGATGGCAGAGATTTGAAAGTGCACCATTAGGCCTTGCAAAGGAGGACTTGACCTGGACATTTTGCAGTTCTTTATGGCGAGGTTAAAGTTGCCAGTTTCCACCAATGGCTGTCTTCCATTCAGCGGTTTTACCAGAGGGTCCTTATCCTGCCAAGTGTACTTCATTGTAGGGATGTTTTCAGGTTGGAGGCATGTTGGAACAGTGTAGCTCAGAATGTGCACATCTGTGTAGTACGCATGGGGCACGGTGAAATACCACACTGTCTCCGCATTTTCAGGAAGAGTGTTTGGGGTAAAGAAATCCTGGGTTGAACTCCTCTCTGGGAGAACAACATGGATATTAGCTAGTGAGTTAATGGCACGTCCTAGTGATAAACCGATTTCTTTCATGTTCAGAGGCTGACCTCCGGACACTTCCAAAGACAGTTTTCCAACATTACGCACATGGACTGCACTAATGGCTCCATTCTGACAAAACCTCCCAACACTGACATCCTCCGCTGTGATCATATAAACGTGTTTGTCTGGGCATCCGTCTGTAGGCTGAATCTGCCGTAAACCAGTCCTACTGAAATTCAAATAGATTGTCCCTGTAGCCGGAGGCTTCAGATTCCAGGTGAAGATCCGATTGAACTTTCGAAAGGCATGGTGTTCTTTGGGTTCAATGTTTGATTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU305744 True 687 lncRNA 0.46 2 3351600 3352903

Neighbor

gene id symbol gene type direction distance location
CI01000065_03159239_03164326 LARS2 coding downstream 187274 3159239 ~ 3164326 (-)
CI01000065_03113629_03136974 LARS2 coding downstream 214626 3113458 ~ 3136974 (-)
CI01000065_03060532_03105332 LIMD1 coding downstream 245425 3059417 ~ 3106175 (-)
CI01000065_03037531_03045960 SMPDL3B coding downstream 305640 3037361 ~ 3045960 (-)
CI01000065_03015397_03024204 NA coding downstream 327396 3014852 ~ 3024204 (-)
CI01000065_03369379_03371121 NA coding upstream 16016 3368919 ~ 3371441 (-)
CI01000065_03373810_03377138 NA coding upstream 19800 3372703 ~ 3377138 (-)
CI01000065_03385522_03396519 FEZ2 coding upstream 32619 3385522 ~ 3397081 (-)
CI01000065_03413002_03434286 WDR26, WDR26.S coding upstream 59826 3412729 ~ 3434286 (-)
CI01000065_03442791_03477709 DNAJC27, ADCY3A, ADCY3 coding upstream 89692 3442595 ~ 3477709 (-)
G269348 NA non-coding downstream 46061 3304357 ~ 3312480 (-)
G269337 NA non-coding downstream 242045 3108288 ~ 3109555 (-)
CI01000065_02979795_02989709 BVES non-coding downstream 373008 2977843 ~ 2989763 (-)
G269304 NA non-coding downstream 401268 2949545 ~ 2950332 (-)
G269303 NA non-coding downstream 412433 2938708 ~ 2939167 (-)
G269436 NA non-coding upstream 44207 3397110 ~ 3397359 (-)
G269440 NA non-coding upstream 84235 3437138 ~ 3437390 (-)
G269399 NA non-coding upstream 137669 3490572 ~ 3491380 (-)
G269446 NA non-coding upstream 143185 3496088 ~ 3496312 (-)
G269448 NA non-coding upstream 164833 3517736 ~ 3518149 (-)
CI01000065_00782736_00793467 NT5C3A, NT5C3 other downstream 2567939 782697 ~ 793467 (-)
CI01000065_00622545_00624625 NA other downstream 2726943 622123 ~ 624657 (-)
CI01000065_00563411_00579174 MBPB, MBP other downstream 2771573 562848 ~ 580083 (-)
CI01000065_00050903_00055774 NA other downstream 3297213 50386 ~ 55774 (-)
G269679 NA other upstream 420977 3773880 ~ 3774294 (-)
CI01000065_03794501_03806693 VEGFAA, VEGFA other upstream 440220 3793123 ~ 3806693 (-)

Expression


Co-expression Network