G269225


Basic Information

Item Value
gene id G269225
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000065
NCBI id null
chromosome length 4956624
location 3552804 ~ 3553214 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU305478
AGGACATGGATTACTGGAACCATGTCCTGTGGTCTGATGAGACCAAGATAAACTTATTTGGTTCAGATGGTGTCAAGCGTGTGTGGCGGCAACCAGGTGAGGAGTACAAAGACAAGTGTGTCTTGCCTACAGTCAAGCATGGTGGTGGGAGTGTCATGGTCTGGGGCTGCATGAGTGCTGCCGGCACTGGGGAGCTACAGTTCATTGAGGGAACCATGAATGTCAACATGTACTGTGACATACTGAAGCAGAGCATGATCCCCTCCCTTCGGAGACTGGGCCGCAGGGCAGTATTCCAACATGATAACGACCCCAAACACA
>TU305476
TGGTCTGATGAGACCAAGATAAACTTATTTGGTTCAGATGGTGTCAAGCGTGTGTGGCGGCAACCAGGTGAGGAGTACAAAGACAAGTGTGTCTTGCCTACAGTCAAGCATGGTGGTGGGAGTGTCATGGTCTGGGGCTGCATGAGTGCTGCCGGCACTGGGGAGCTACAGTTCATTGAGGGAACCATGAATGTCAACATGTACTGTGACATACTGAAGCAGAGCATGATCCCCTCCCTTCGGAGACTGGGCCGCAGGGCAGTATTCCAACATGATAACGACCCCAAACACA
>TU305479
TGGTCTGATGAGACCAAGATAAACTTATTTGGTTCAGATGGTGTCAAGCGTGTGTGGCGGCAACCAGGTGAGGAGTACAAAGACAAGTGTGTCTTGCCTACAGTCAAGCATGGTGGTGGGAGTGTCATGGTCTGGGGCTGCATGAGTGCTGCCGGCACTGGGGAGCTACAGTTCATTGAGGGAACCATGAATGTCAACATGTACTGTGACATACTGAAGCAGAGCATGATCCCCTCCCTTCGGAGACTGGGCCGCAGGGCAGTATTCCAACATGATAACGACCCCAAACACACCTCCAAGACAACCACTGCCTTGATAAAGAAGCTGAGGGTACCTAAACCCTATTGAGCATCTGTGGGGCATCCTCAAACAGAAGGGGGAG
>TU305477
TGGCGGCAACCAGGTGAGGAGTACAAAGACAAGTGTGTCTTGCCTACAGTCAAGCATGGTGGTGGGAGTGTCATGGTCTGGGGCTGCATGAGTGCTGCCGGCACTGGGGAGCTACAGTTCATTGAGGGAACCATGAATGTCAACATGTACTGTGACATACTGAAGCAGAGCATGATCCCCTCCCTTCGGAGACTGGGCCGCAGGGCAGTATTCCAACATGATAACGACCCCAAACACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU305478 False 321 TUCP 0.51 1 3552804 3553124
TU305476 False 292 lncRNA 0.52 1 3552833 3553124
TU305479 False 382 lncRNA 0.52 1 3552833 3553214
TU305477 True 238 lncRNA 0.54 1 3552887 3553124

Neighbor

gene id symbol gene type direction distance location
CI01000065_03486630_03494354 NA coding upstream 57093 3486567 ~ 3495740 (+)
CI01000065_03398558_03399971 CNIH4 coding upstream 152408 3398558 ~ 3400425 (+)
CI01000065_03344678_03368295 NA coding upstream 184361 3344331 ~ 3368472 (+)
CI01000065_03304326_03307505 NA coding upstream 245276 3303725 ~ 3307557 (+)
CI01000065_03244494_03285831 NA coding upstream 267002 3244494 ~ 3285831 (+)
CI01000065_03692428_03692874 NA coding downstream 139214 3692428 ~ 3693420 (+)
CI01000065_03709249_03716992 NA coding downstream 155930 3709144 ~ 3717908 (+)
CI01000065_03815841_03816140 NA coding downstream 259644 3812858 ~ 3816590 (+)
CI01000065_03980525_03983765 NA coding downstream 427311 3980525 ~ 3984923 (+)
CI01000065_03986974_04006773 CYP4T8 coding downstream 433760 3986974 ~ 4007259 (+)
G269223 NA non-coding upstream 842 3551770 ~ 3551991 (+)
G269218 NA non-coding upstream 10261 3542103 ~ 3542572 (+)
G269205 NA non-coding upstream 36292 3516294 ~ 3516541 (+)
G269181 NA non-coding upstream 91014 3458957 ~ 3462928 (+)
G269167 NA non-coding upstream 114294 3437972 ~ 3438539 (+)
G269232 NA non-coding downstream 14117 3567331 ~ 3567533 (+)
G269238 NA non-coding downstream 26842 3580056 ~ 3580380 (+)
G269240 NA non-coding downstream 29719 3582933 ~ 3583163 (+)
G269505 NA non-coding downstream 77470 3630684 ~ 3631579 (+)
G269501 NA non-coding downstream 140643 3693857 ~ 3695267 (+)
G268805 NA other upstream 914628 2608907 ~ 2638205 (+)
G268525 NA other upstream 1312835 2239159 ~ 2239998 (+)
G267577 NA other upstream 2470178 1082153 ~ 1082655 (+)
G267432 NA other upstream 2769954 782283 ~ 782879 (+)

Expression


Co-expression Network