Gene
RNA
| Item | Value |
|---|---|
| gene id | G269645 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000065 |
| NCBI id | null |
| chromosome length | 4956624 |
| location | 3714847 ~ 3715306 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU305984 | True | 460 | lncRNA | 0.40 | 1 | 3714847 | 3715306 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000065_03701147_03703052 | RRP15 | coding | downstream | 11795 | 3701131 ~ 3703052 (-) |
| CI01000065_03694059_03694764 | NA | coding | downstream | 20083 | 3693807 ~ 3694764 (-) |
| CI01000065_03648940_03692253 | TGFB2 | coding | downstream | 22479 | 3648403 ~ 3692368 (-) |
| CI01000065_03602063_03603667 | NA | coding | downstream | 109539 | 3600762 ~ 3605308 (-) |
| CI01000065_03589916_03598053 | NA | coding | downstream | 116701 | 3589771 ~ 3598146 (-) |
| CI01000065_03794501_03806693 | VEGFAA, VEGFA | coding | upstream | 78554 | 3793123 ~ 3806693 (-) |
| CI01000065_03845250_03848939 | NA | coding | upstream | 128221 | 3843527 ~ 3848941 (-) |
| CI01000065_03935077_03938904 | NA | coding | upstream | 219712 | 3935018 ~ 3938904 (-) |
| CI01000065_03944604_03949933 | NA | coding | upstream | 229275 | 3944581 ~ 3950187 (-) |
| CI01000065_04027497_04039742 | PPP1R8B, PPP1R8 | coding | upstream | 311204 | 4026510 ~ 4039742 (-) |
| G269630 | NA | non-coding | downstream | 73850 | 3640753 ~ 3640997 (-) |
| G269629 | NA | non-coding | downstream | 74436 | 3640120 ~ 3640411 (-) |
| G269470 | NA | non-coding | downstream | 137109 | 3577489 ~ 3577738 (-) |
| G269463 | NA | non-coding | downstream | 160321 | 3554317 ~ 3554526 (-) |
| G269462 | NA | non-coding | downstream | 161734 | 3552889 ~ 3553113 (-) |
| G269647 | NA | non-coding | upstream | 3177 | 3718483 ~ 3718687 (-) |
| G269650 | NA | non-coding | upstream | 8273 | 3723579 ~ 3723956 (-) |
| G269651 | NA | non-coding | upstream | 13339 | 3728645 ~ 3728919 (-) |
| G269664 | NA | non-coding | upstream | 34800 | 3750106 ~ 3750343 (-) |
| G269665 | NA | non-coding | upstream | 35514 | 3750820 ~ 3751059 (-) |
| G269348 | NA | other | downstream | 402367 | 3304357 ~ 3312480 (-) |
| CI01000065_00782736_00793467 | NT5C3A, NT5C3 | other | downstream | 2931186 | 782697 ~ 793467 (-) |
| CI01000065_00622545_00624625 | NA | other | downstream | 3090190 | 622123 ~ 624657 (-) |
| CI01000065_00563411_00579174 | MBPB, MBP | other | downstream | 3134820 | 562848 ~ 580083 (-) |
| CI01000065_00050903_00055774 | NA | other | downstream | 3660460 | 50386 ~ 55774 (-) |
| G269679 | NA | other | upstream | 58574 | 3773880 ~ 3774294 (-) |
