G269569


Basic Information

Item Value
gene id G269569
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000065
NCBI id null
chromosome length 4956624
location 3798157 ~ 3802643 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU305902
TGGAACGACACGAGGGTGAGTAAATGATCACAGAATTTTCATTTTTGGGTAAACTATCCTTTTAACTTGTTTCAGTGTAGTACAGACAAGAGCCCAAGAGACAAGAGATTGTTTTCAGAAACGTCAATGGGCCTCAATACAGGTGAGGGATCACATGAACGTGGCGTCATCCCAACTGTGGCGGCACATTAGTATGATAATGACAGAGACAGCCATGCAACCACTGTTTATTTACCTTTGGTTGCTTTCGTCTTTGCGGGCTTTGGGCCAACAGTGTGAATATGAGTACAAATAAATGCAGACTGAGTGAGATTACAAAGAGCAAACAAACTGCCCTGAAATAAAGCCAATGACTGAGAGCAAAATACTGCTTGAGCGCAGGTGAGCCGAGGCGTTGAGATCGCCTGTATCTCCCTCTCTTGCTCTTTTTCGGCTTTTAACCCTCCCCACTCTGGGTTTTCTGCAAAAAAGGAAAATAACGCAAGAATAGGACATCTAAAAAATTGAAGTTTCGAACAGTTATGCTGAGAAAGATCTATCAGCACTAGGGATGTCAAAAGTACAGGTACTCCAGTAACAAGTTGATACTAACAAGTTGATTTTGTTTTGTTTTTTTTAATTTTTGTTAAATTGATTTTTTGTTTACTTGCACTACCGTTCAATTTTCTTTTGTTTTTTTTAAGAAATGAATCATTTTATTCAGCAAGGAAGCATTAAATTGATCAAAAGTGACAATAAAGAGACATTTATAATGTTACAAAAGATTTCTATTCCAAATAAAAGCTGTTCTTTTAAATTTTCTATTCATTAAAGAATCCTGTAATCTAAAATGTATCACGGTTTCCACAAAAATATGAAGCAGCACAACTGTTTTCAACATTGATAACAATAAGAAATTTCTGATTTCTGAAGGATCATGTGACACTGAAAACTGGAGTAAATTGTAATAATATTTCACAATATTACATTTTTTTCTGTATTTGTAATCAGATAAATGCAGCCTTGGTGAGCAGAAGAGACTTCTTTTTAAAAAACATCAAATCGTACAAATTTTGAACGGTAGTGTAAAGGCTATATGCCACTGTTTTGAACCTAATTTATATATTTATATTAATATTTAACATTTTAAATAAAGTAATATACATATTCATTATTCATTTTTGCTGTGATTTCATAATTGATACTGGTGTTAGTATCGACTACTGAAATTTCGCTATTGTGACAACCCTAATCTCCACCAATTAAAGCGAGGAGCAGCACGTCACGCACAGGCCTCATGAAGAATCAAGGATAGACGCTATAGTCCAAATAAGCAGCTGAATGAGCCGTAGCATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGAGGAGCTTAGAGGTAAGGATCGAAGTACAAGGAGCTGAACTTGAGCTTGTGAATCAGAGTCGCTGGACTCCCCGCCCCCCGCTTGCCTACGTGCTGAAAGACAGGAGGTAGAGACGACACGCAGAGAGTCGGCGCTTAGCCCCATGACGAACGGATTTCATTTAGCCCTCTCAGCTAACCTGATCCATCTCTGTACGCTCGCATTAACCTACCAAGGTGCATAAATGCACACAGCCGACGCACATCCAATTATACGGGGTCATTCCATTAGATTAGACACTTTTCTGAGCCATTTTTGTAATGACCTTTGACCAACTGGTCATTTAGTGGAAGCATGAAATATGTAATAATATCCAGCTTTCTCACTTAATATCCAACAATATTACTAATTTAACTACACTGACACTATCGGATGAGAACAAAACTTGTGCTGATTTGCAAACTTGCTAAATGCTAAAAATAAAGGTGACTTGGCTTAGTAAACCTGCTGTTGTATATTGTGAATTATGGTGGCTCTTTGACAAATTGCTTGTTCCTCTTTTGAAGTTGCTTTGGATAAAATGCTTTTTTTATGCTATTTTTCCTTAAAATAACTGACATTTGTTTTAATATTTCTGTTATGCAACACAATGAATGGTTTCGGTGGATTTAGATACTTTTGTGGTCTATGTATACTCTACTAAGACACAATGGCACTAAATAAGGTTTGTGAAACAGCTCACAATAACCAACAATAACCTCTGTCTCAGGATCACCTACTATTTAAAAGACTAAAAATAAAAGTGGGTTAACGACAGACACTTGCTACTATGATTAGTATGGGGAAGTAGGCAAGGGTCAGCCTTGAGCAACTGTGGTGTGACAGGCAGCGGGTGGTCTTCACAGCCACCATCTTACAGCTGCCACAGAGAGCAAAAGCCACGCCCCAAAAGAAAAACTGAAACCATCCTATAAAAGAGTCTGTTATCAGAGCTCAGGTCAGAGGTCTTGAGAGATATACAGAGAAATTCAGGCTTTTACTGTGGGCTGTAAAACCCTCAGAGCGGACTGACAGACACATGATGAGCTGCACACTCTACTCATGGATTGTTCTTGCTCTAAAATTAGATTGCACTAGTCACATTTGAAGGCATATTACTGGGCAAATGAATTGTTTATTGTGGTCACATTTCTGCAGCCAACCTTTTAATAAAAGCAATCAACCAATCATGGCTTTATATTACAACACTTAGGGGCCGTTCACATATCGCGTCTTTTGCACACTCAAGTTCGTTATTATACGTTATTTCACGCTTGCAATAGAGAGCAATGCTGTCACAACACTCATGCGTTGCGACACGCTTGTTTTATCCGGGCGTCTACGCCGCAGAGAGATCAGAGATTGTTATATTATAGGGAGATGAGAGGGTCTGTATCTCTTACCACTGGAGAAAGCGTAACGGCTAACTTAATCACGTGCGGCACCTCTCAGCCTATTGTGTAATGGCAATGACATCAGTCGCAACATTCCCTAGTCTGCCTTCTCTTTAAAAAATACATTTTTATCAAGCTAAAATCTACATATAGTTCCCAACAAAAGTATTGTTTAGTGTAAAACATGCTGAAGATTAGCAAACAGGCTGTCGATTAATTAAATGATTAGCTATTTCCCCACAAAAGCTGTTTAATCAGCATAGTGAAGCCTCTCATCCATTAGCATTAGCCATTACGCTTTTTTGGCTAAAGGCTGCAGGCTTGACTTCCAGTAGCTTTGGCAAGATAAAAAAATCCCAACTTTTCAGAATGCCGCAAGAGCATCGCAGGTCATGTGACATGAACCAACCAATCAGCTTCACCCTTTACGATTACGAGCTGTGCGATTTGTCAAGCGGCTATTATTTTCGTTGCTGGAAATCCATTTGTCCTGAGTGCATTGGAAAGGAGGAGAAAGCAGCGCGGCCGGCGTTTTCCACACGTTTTTAATGTGACGTGAGTGGTCGCTTAATTTCCTCAATATTATTGATTTAGCTACACTGACAGTATCGGATGAGAACAAAACTTGAACTGACTTGAGCTGAATAACGACACTAGTTTGCATCATTAATTCTGTTACTCTCCTGTTTATTACTGTGAAGCTGCTTTGAAACAATTTCTGTTGTATGAAGCGCTATTAAAATAAAGGTAAAGCTGTGCATTGCAGTCATTTTACCACATTCTGATGAATTCTACTGGATTTAAATATAATAAAATGTGCTAAATTGAGCTGCACTCTTATTTGTAGCTGAATGTGTATTACCAAAAAATATGTCGGAAACAAACATGCAAGGGGTGGGAGATTTTGTAGAAATTTGTGAATAAAGGGCACTGCAATTCCATGAGGATCTGCAAAGCTTTCTGAGGGCACAGATTCAGCATGGGACTGCTAATGCATTTTATCCAAAAAGATTTGCATAATTACTTTTTTTATTTTTTCTCTCAGTTTTTCTTTGTGAGACAGGCTGCCATGTTCAGCAGATGGCAATCATTAAATAATGAATGGTTATCTGCCAGAAATAGAGATGTACTTGCTATAAAAAGACATCTAACACAAATAAAAGGAAAAGCAGGTTGTGTCATGATTAAGTCCTATTGAAAGCAGCGAGTCTTGAGTTTGTGCCTGAGGATTAGGAGGGATTCGGCCTTTGTGACATTTAGTGGAAGTTGATTTCACTGTTTGGGTGTGAGAACAGTCAAGTGTTTCACTTTATAAGCTTTGTTGTAGGGAAACAGGGTTGAGGGTGTGTCAAGGCGTGCTGTGGGAGTCATGACGAGTCGTGGTCGTAGAGATGTTTACGCACCAGATTTAAGTCGATATATTGAATGCTCACAATATACGAAAATGCCAAAGTCCCTTTCAAGGAATATGGCGGCCATATTTGCAAGACCTCCGGGCAGCTATTTCGGCATCCAAGATCAAGTCCTATCTAATGGAATGGGGGAATCCTGAAATCTCAAAAACTGCTTGAGTGAACTCACAATTAAATAATATATTTCAAATTAGTCCCATAAATGTTGTTTCTCATACACAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU305902 True 4425 lncRNA 0.39 2 3798157 3802643

Neighbor

gene id symbol gene type direction distance location
CI01000065_03709249_03716992 NA coding upstream 80249 3709144 ~ 3717908 (+)
CI01000065_03692428_03692874 NA coding upstream 104737 3692428 ~ 3693420 (+)
CI01000065_03486630_03494354 NA coding upstream 302417 3486567 ~ 3495740 (+)
CI01000065_03398558_03399971 CNIH4 coding upstream 397732 3398558 ~ 3400425 (+)
CI01000065_03344678_03368295 NA coding upstream 429685 3344331 ~ 3368472 (+)
CI01000065_03815841_03816140 NA coding downstream 10215 3812858 ~ 3816590 (+)
CI01000065_03980525_03983765 NA coding downstream 177882 3980525 ~ 3984923 (+)
CI01000065_03986974_04006773 CYP4T8 coding downstream 184331 3986974 ~ 4007259 (+)
CI01000065_04008274_04010105 NA coding downstream 205631 4008274 ~ 4010194 (+)
CI01000065_04044257_04051771 THEMIS2 coding downstream 241614 4044257 ~ 4052283 (+)
G269587 NA non-coding upstream 10723 3787197 ~ 3787434 (+)
G269586 NA non-coding upstream 11230 3786638 ~ 3786927 (+)
G269581 NA non-coding upstream 27552 3761827 ~ 3770605 (+)
G269573 NA non-coding upstream 50754 3747188 ~ 3747403 (+)
G269548 NA non-coding upstream 75548 3722294 ~ 3722609 (+)
G269592 NA non-coding downstream 21949 3824592 ~ 3824811 (+)
G269605 NA non-coding downstream 53356 3855999 ~ 3856276 (+)
G269607 NA non-coding downstream 56880 3859523 ~ 3859979 (+)
G269733 NA non-coding downstream 100736 3903379 ~ 3903627 (+)
G269734 NA non-coding downstream 101448 3904091 ~ 3904490 (+)
G269225 NA other upstream 245033 3552804 ~ 3553214 (+)
G269181 NA other upstream 335229 3458957 ~ 3462928 (+)
G268805 NA other upstream 1159952 2608907 ~ 2638205 (+)
G268525 NA other upstream 1558159 2239159 ~ 2239998 (+)
G267577 NA other upstream 2715502 1082153 ~ 1082655 (+)

Expression


Co-expression Network