Gene
RNA
| Item | Value |
|---|---|
| gene id | G269919 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000065 |
| NCBI id | null |
| chromosome length | 4956624 |
| location | 4283590 ~ 4283878 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| Transposable element Tcb2 transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU306280 | True | 289 | lncRNA | 0.42 | 1 | 4283590 | 4283878 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000065_04277095_04282609 | NA | coding | upstream | 391 | 4276008 ~ 4283199 (+) |
| CI01000065_04247989_04251347 | FAM46A.L, FAM46AB, FAM46A, FAM46AA | coding | upstream | 31793 | 4245663 ~ 4251797 (+) |
| CI01000065_04183838_04222038 | NA | coding | upstream | 61123 | 4183838 ~ 4222467 (+) |
| CI01000065_04115052_04165049 | NA | coding | upstream | 118161 | 4112278 ~ 4165429 (+) |
| CI01000065_04081314_04103789 | NA | coding | upstream | 179629 | 4081314 ~ 4103961 (+) |
| CI01000065_04361047_04363753 | NA | coding | downstream | 77059 | 4360937 ~ 4363839 (+) |
| CI01000065_04520939_04539169 | ELOVL4, ELOVL4A | coding | downstream | 236970 | 4520848 ~ 4539261 (+) |
| CI01000065_04547859_04555579 | SOGA3 | coding | downstream | 263981 | 4547859 ~ 4555579 (+) |
| CI01000065_04561164_04574594 | NA | coding | downstream | 277240 | 4561118 ~ 4574656 (+) |
| CI01000065_04578385_04586426 | ECHDC1 | coding | downstream | 293962 | 4577840 ~ 4586454 (+) |
| G269917 | NA | non-coding | upstream | 4219 | 4279068 ~ 4279371 (+) |
| G269915 | NA | non-coding | upstream | 28622 | 4254691 ~ 4254968 (+) |
| G269912 | NA | non-coding | upstream | 39049 | 4244199 ~ 4244541 (+) |
| G269908 | NA | non-coding | upstream | 48257 | 4235055 ~ 4235333 (+) |
| G269907 | NA | non-coding | upstream | 48903 | 4233690 ~ 4234687 (+) |
| G269948 | NA | non-coding | downstream | 50042 | 4333920 ~ 4334177 (+) |
| G269959 | NA | non-coding | downstream | 65232 | 4349110 ~ 4349430 (+) |
| G269963 | NA | non-coding | downstream | 80076 | 4363954 ~ 4364248 (+) |
| G269965 | NA | non-coding | downstream | 86618 | 4370496 ~ 4370763 (+) |
| G269966 | NA | non-coding | downstream | 86928 | 4370806 ~ 4371194 (+) |
| G269225 | NA | other | upstream | 730466 | 3552804 ~ 3553214 (+) |
| G269181 | NA | other | upstream | 820662 | 3458957 ~ 3462928 (+) |
| G268805 | NA | other | upstream | 1645385 | 2608907 ~ 2638205 (+) |
| G268525 | NA | other | upstream | 2043592 | 2239159 ~ 2239998 (+) |
| G267577 | NA | other | upstream | 3200935 | 1082153 ~ 1082655 (+) |
