G269965


Basic Information

Item Value
gene id G269965
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000065
NCBI id null
chromosome length 4956624
location 4370496 ~ 4370763 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU306339
TCGAACGGAGCATTTCAGCCAATTACAGAGCTGCAGATGTTTTTCTGAGGCAAAACATTTATGAGCTGTATTTATATGTTAGGTTGGCTTTTTCAGCACTTGAAACATTTGTCTAAGTTTCTCTATTGTTTGTTTTAAAGTATATTTGGTGTGAAAGTGATTAGCATGCTACTGTGTCTACACAGGACGCGAGCGACGTGACAATAGAGCCCATTGATTATAATCAGTAATATAATGTCTACACTGGATGCAGGCGGCGTGGCGCAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU306339 True 268 lncRNA 0.40 1 4370496 4370763

Neighbor

gene id symbol gene type direction distance location
CI01000065_04361047_04363753 NA coding upstream 6657 4360937 ~ 4363839 (+)
CI01000065_04277095_04282609 NA coding upstream 87297 4276008 ~ 4283199 (+)
CI01000065_04247989_04251347 FAM46A.L, FAM46AB, FAM46A, FAM46AA coding upstream 118699 4245663 ~ 4251797 (+)
CI01000065_04183838_04222038 NA coding upstream 148029 4183838 ~ 4222467 (+)
CI01000065_04115052_04165049 NA coding upstream 205067 4112278 ~ 4165429 (+)
CI01000065_04520939_04539169 ELOVL4, ELOVL4A coding downstream 150085 4520848 ~ 4539261 (+)
CI01000065_04547859_04555579 SOGA3 coding downstream 177096 4547859 ~ 4555579 (+)
CI01000065_04561164_04574594 NA coding downstream 190355 4561118 ~ 4574656 (+)
CI01000065_04578385_04586426 ECHDC1 coding downstream 207077 4577840 ~ 4586454 (+)
CI01000065_04672707_04680741 NA coding downstream 301876 4672639 ~ 4681582 (+)
G269963 NA non-coding upstream 6248 4363954 ~ 4364248 (+)
G269959 NA non-coding upstream 21066 4349110 ~ 4349430 (+)
G269948 NA non-coding upstream 36319 4333920 ~ 4334177 (+)
G269919 NA non-coding upstream 86618 4283590 ~ 4283878 (+)
G269917 NA non-coding upstream 91125 4279068 ~ 4279371 (+)
G269966 NA non-coding downstream 43 4370806 ~ 4371194 (+)
G269967 NA non-coding downstream 5294 4376057 ~ 4379502 (+)
G269999 NA non-coding downstream 129530 4500293 ~ 4505119 (+)
G270062 NA non-coding downstream 131450 4502213 ~ 4512608 (+)
G270001 NA non-coding downstream 144991 4515754 ~ 4526214 (+)
G269225 NA other upstream 817372 3552804 ~ 3553214 (+)
G269181 NA other upstream 907568 3458957 ~ 3462928 (+)
G268805 NA other upstream 1732291 2608907 ~ 2638205 (+)
G268525 NA other upstream 2130498 2239159 ~ 2239998 (+)
G267577 NA other upstream 3287841 1082153 ~ 1082655 (+)

Expression


Co-expression Network