Gene
RNA
| Item | Value |
|---|---|
| gene id | G269966 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000065 |
| NCBI id | null |
| chromosome length | 4956624 |
| location | 4370806 ~ 4371194 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU306341 | False | 323 | lncRNA | 0.41 | 1 | 4370806 | 4371128 |
| TU306343 | False | 389 | lncRNA | 0.39 | 1 | 4370806 | 4371194 |
| TU306340 | False | 279 | lncRNA | 0.39 | 1 | 4370850 | 4371128 |
| TU306342 | True | 345 | lncRNA | 0.38 | 1 | 4370850 | 4371194 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000065_04361047_04363753 | NA | coding | upstream | 6967 | 4360937 ~ 4363839 (+) |
| CI01000065_04277095_04282609 | NA | coding | upstream | 87607 | 4276008 ~ 4283199 (+) |
| CI01000065_04247989_04251347 | FAM46A.L, FAM46AB, FAM46A, FAM46AA | coding | upstream | 119009 | 4245663 ~ 4251797 (+) |
| CI01000065_04183838_04222038 | NA | coding | upstream | 148339 | 4183838 ~ 4222467 (+) |
| CI01000065_04115052_04165049 | NA | coding | upstream | 205377 | 4112278 ~ 4165429 (+) |
| CI01000065_04520939_04539169 | ELOVL4, ELOVL4A | coding | downstream | 149654 | 4520848 ~ 4539261 (+) |
| CI01000065_04547859_04555579 | SOGA3 | coding | downstream | 176665 | 4547859 ~ 4555579 (+) |
| CI01000065_04561164_04574594 | NA | coding | downstream | 189924 | 4561118 ~ 4574656 (+) |
| CI01000065_04578385_04586426 | ECHDC1 | coding | downstream | 206646 | 4577840 ~ 4586454 (+) |
| CI01000065_04672707_04680741 | NA | coding | downstream | 301445 | 4672639 ~ 4681582 (+) |
| G269965 | NA | non-coding | upstream | 43 | 4370496 ~ 4370763 (+) |
| G269963 | NA | non-coding | upstream | 6558 | 4363954 ~ 4364248 (+) |
| G269959 | NA | non-coding | upstream | 21376 | 4349110 ~ 4349430 (+) |
| G269948 | NA | non-coding | upstream | 36629 | 4333920 ~ 4334177 (+) |
| G269919 | NA | non-coding | upstream | 86928 | 4283590 ~ 4283878 (+) |
| G269967 | NA | non-coding | downstream | 4863 | 4376057 ~ 4379502 (+) |
| G269999 | NA | non-coding | downstream | 129099 | 4500293 ~ 4505119 (+) |
| G270062 | NA | non-coding | downstream | 131019 | 4502213 ~ 4512608 (+) |
| G270001 | NA | non-coding | downstream | 144560 | 4515754 ~ 4526214 (+) |
| G270090 | NA | non-coding | downstream | 338815 | 4710009 ~ 4714110 (+) |
| G269225 | NA | other | upstream | 817682 | 3552804 ~ 3553214 (+) |
| G269181 | NA | other | upstream | 907878 | 3458957 ~ 3462928 (+) |
| G268805 | NA | other | upstream | 1732601 | 2608907 ~ 2638205 (+) |
| G268525 | NA | other | upstream | 2130808 | 2239159 ~ 2239998 (+) |
| G267577 | NA | other | upstream | 3288151 | 1082153 ~ 1082655 (+) |
