G269967


Basic Information

Item Value
gene id G269967
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000065
NCBI id null
chromosome length 4956624
location 4376057 ~ 4379502 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU306344
AGTTCTCTCGTCGCCATTTTCCTTTGCCTCGCACTAAAAGGATACACTCATTATTGAAGAAAGGTTTTCAAGTACACGAATGAGGCTAGATGATGAAGCTAAAAAAGCTGGTGGAATCCACTGCAGAAATCTGGTGGGGAGCTTATAATAAATGAATAGAATCAAATTACGTCTTTGGGGGATGAAACGAGAAAAACTGCCAATATCCTGTCAGCTGACATGACAGAAAAGAATGGTACATCACAACCAAGAAAGGTGAATGAGAAATATGAGTAATTGTGGTGTTGTTCCTGTATCTCAGTGACCCCTTCTTCAAAAATGGCTAGGAGCATTGCTATGTTGGTGAGAGTGCCACCAGATACTTGCCATGGAGAATCAAAACTATACAGAGAGGCATTGCTAAAGAACAAGGAGTATCATTTGAAGGAAAAGGATTGTCTTGTCAAGGCCAGAAAAGGCATCTACGTCTCAAATAGGGATATCTTGTCTTCTAGAAGGTCTGTTTTTATTTATTATTATTTTTATTATTATTTTCTTGTAGTTTTCTTTGAGCATTGAGG
>TU306347
AGTTCTCTCGTCGCCATTTTCCTTTGCCTCGCACTAAAAGTCCCTGTCTTCATCCTTTGACTCCACTGACTCACAGGATACACTCATTATTGAAGAAAGGTTTTCAAGTACACGAATGAGGCTAGATGATGAAGCTAAAAAAGTACATCACAACCAAGAAAGGTGAATGAGAAATATGAGTAATTGTGGTGTTGTTCCTGTATCTCAGTGACCCCTTCTTCAAAAATGGCTAGGAGCATTGCTATGTTGGTGAGAGTGCCACCAGATACTTGCCATGGAGAATCAAAACTATACAGAGAGGCATTGCTAAAGAACAAGGAGTATCATTTGAAGGAAAAGGATTGTCTTGTCAAGGCCAGAAAAGGCATCTACGTCTCAAATAGGGATATCTTGTCTTCTAGAAGGTCTGTTTTTATTTATTATTATTTTTATTATTATTTTCTTGTAGTTTTCTTTGAGCATTGAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU306344 False 560 lncRNA 0.38 6 4376057 4379502
TU306347 True 467 lncRNA 0.38 5 4376057 4379502

Neighbor

gene id symbol gene type direction distance location
CI01000065_04361047_04363753 NA coding upstream 12218 4360937 ~ 4363839 (+)
CI01000065_04277095_04282609 NA coding upstream 92858 4276008 ~ 4283199 (+)
CI01000065_04247989_04251347 FAM46A.L, FAM46AB, FAM46A, FAM46AA coding upstream 124260 4245663 ~ 4251797 (+)
CI01000065_04183838_04222038 NA coding upstream 153590 4183838 ~ 4222467 (+)
CI01000065_04115052_04165049 NA coding upstream 210628 4112278 ~ 4165429 (+)
CI01000065_04520939_04539169 ELOVL4, ELOVL4A coding downstream 141346 4520848 ~ 4539261 (+)
CI01000065_04547859_04555579 SOGA3 coding downstream 168357 4547859 ~ 4555579 (+)
CI01000065_04561164_04574594 NA coding downstream 181616 4561118 ~ 4574656 (+)
CI01000065_04578385_04586426 ECHDC1 coding downstream 198338 4577840 ~ 4586454 (+)
CI01000065_04672707_04680741 NA coding downstream 293137 4672639 ~ 4681582 (+)
G269966 NA non-coding upstream 4863 4370806 ~ 4371194 (+)
G269965 NA non-coding upstream 5294 4370496 ~ 4370763 (+)
G269963 NA non-coding upstream 11809 4363954 ~ 4364248 (+)
G269959 NA non-coding upstream 26627 4349110 ~ 4349430 (+)
G269948 NA non-coding upstream 41880 4333920 ~ 4334177 (+)
G269999 NA non-coding downstream 120791 4500293 ~ 4505119 (+)
G270062 NA non-coding downstream 122711 4502213 ~ 4512608 (+)
G270001 NA non-coding downstream 136252 4515754 ~ 4526214 (+)
G270090 NA non-coding downstream 330507 4710009 ~ 4714110 (+)
G270054 NA non-coding downstream 403367 4782869 ~ 4784552 (+)
G269225 NA other upstream 822933 3552804 ~ 3553214 (+)
G269181 NA other upstream 913129 3458957 ~ 3462928 (+)
G268805 NA other upstream 1737852 2608907 ~ 2638205 (+)
G268525 NA other upstream 2136059 2239159 ~ 2239998 (+)
G267577 NA other upstream 3293402 1082153 ~ 1082655 (+)

Expression


Co-expression Network