Gene
RNA
| Item | Value |
|---|---|
| gene id | XLOC_010422 |
| gene name | ndufb9 |
| gene type | coding |
| species | zebrafish (Danio rerio) |
| category of species | model fish |
| Item | Value |
|---|---|
| chromosome id | NC_007127.7 |
| NCBI id | CM002900.2 |
| chromosome length | 55266484 |
| location | 6386941 ~ 6391279 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| symbol | description |
|---|---|
| ndufb9 | Predicted to act upstream of or within mitochondrial electron transport, NADH to ubiquinone. Predicted to be located in mitochondrial inner membrane and respirasome. Predicted to be part of mitochondrial respiratory chain complex I. Human ortholog(s) of this gene implicated in nuclear type mitochondrial complex I deficiency 24. Orthologous to human NDUFB9 (NADH:ubiquinone oxidoreductase subunit B9). |
| id | name | namespace |
|---|---|---|
| GO:0006120 | mitochondrial electron transport, NADH to ubiquinone | biological_process |
| GO:0005747 | mitochondrial respiratory chain complex I | cellular_component |
| id | description |
|---|---|
| ko00190 | Oxidative phosphorylation |
| ko04723 | Retrograde endocannabinoid signaling |
| ko04714 | Thermogenesis |
| ko05208 | Chemical carcinogenesis - reactive oxygen species |
| ko05010 | Alzheimer disease |
| ko05012 | Parkinson disease |
| ko05014 | Amyotrophic lateral sclerosis |
| ko05016 | Huntington disease |
| ko05020 | Prion disease |
| ko05022 | Pathways of neurodegeneration - multiple diseases |
| ko05415 | Diabetic cardiomyopathy |
| ko04932 | Non-alcoholic fatty liver disease |
| id | description |
|---|---|
| ZDB-GENE-030131-8364 | Predicted to act upstream of or within mitochondrial electron transport, NADH to ubiquinone. Predicted to be located in mitochondrial inner membrane and respirasome. Predicted to be part of mitochondrial respiratory chain complex I. Human ortholog(s) of this gene implicated in nuclear type mitochondrial complex I deficiency 24. Orthologous to human NDUFB9 (NADH:ubiquinone oxidoreductase subunit B9). |
| ensembl_id | ENSDARG00000041314 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TCONS_00020477 | False | 637 | mRNA | 0.50 | 4 | 6386941 | 6391275 |
| TCONS_00021781 | True | 526 | lncRNA | 0.49 | 4 | 6387627 | 6391279 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| XLOC_010421 | NA | coding | downstream | 299 | 6383530 ~ 6386642 (-) |
| XLOC_010420 | scgn | coding | downstream | 9269 | 6356460 ~ 6377672 (-) |
| XLOC_010419 | NA | coding | downstream | 35251 | 6291173 ~ 6351690 (-) |
| XLOC_010418 | NA | coding | downstream | 137695 | 6248023 ~ 6249246 (-) |
| XLOC_010417 | ctnnb1 | coding | downstream | 181151 | 6182501 ~ 6205790 (-) |
| XLOC_010423 | mboat1 | coding | upstream | 4032 | 6395311 ~ 6424818 (-) |
| XLOC_010424 | NA | coding | upstream | 84737 | 6476016 ~ 6484227 (-) |
| XLOC_010425 | NA | coding | upstream | 121067 | 6512346 ~ 6556501 (-) |
| XLOC_010426 | NA | coding | upstream | 196743 | 6588022 ~ 6591170 (-) |
| XLOC_010427 | NA | coding | upstream | 214106 | 6605385 ~ 6635296 (-) |
| XLOC_010626 | CR392024.2 | misc | upstream | 14503833 | 20895112 ~ 20895175 (-) |
| XLOC_010416 | BX957314.1 | non-coding | downstream | 516252 | 5870573 ~ 5870689 (-) |
| XLOC_010414 | NA | non-coding | downstream | 600899 | 5746308 ~ 5786042 (-) |
| XLOC_010428 | NA | non-coding | upstream | 256751 | 6648030 ~ 6651719 (-) |
