CI01000066_00438633_00446467


Basic Information

Item Value
gene id CI01000066_00438633_00446467
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000066
NCBI id null
chromosome length 3719324
location 438001 ~ 446701 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000066_00438633_00446467.mRNA
ATTATCTTCAGATGCAAAATAATTGAAAATTATCACATCGATCAAAATTCATTTCTAATTATCACTTCAAAGGATCATCTCAGAGAAAATGAACTAAGAATCAAACGCAGAGACAGACAGGCAACCACACACACAAGCTCCATTTACGACTCAAATAGTGCAGAGTTTGGGGATCTGGTGCTGAAGTAGGGCCCTTGAGGGCCATATTTCTGGCCCCAGCAGGGTGTACCAGCCATGGAGCGATTTACAGTGGGGAGTGAGGGTCTGGATCTCATCTTTAACCAACACTTCAGACGCAGCTCCTGGGCCTCCCTGAGCCCAACGAGCACAGGGCAACACCGGGGGTTGGGCAAAGAGGGAGGGAGACGGCGTTTTATCGCCTGCAGTGTTCAGGCCCGTGTTGACGGCAGCACTTCATGTTGGTCGGGAGAGTTTAGGGGTGTTGTTCATGTTCAACATGCTCAAACATGTGTTAACATTGTTGGGGATCAGCGGGCTGGACCGCGCACATGCCGATCATACCTCGGAGAAAAGCAGCGGAAAATGGGATCTTTAAGTATTCATGTGCTCAGATTCACACAGTGCTCAGGCCTCGGTGAGGGGGGCGCGGAACAGAGCGCAACGGAGGGGAATACGCCAACTGCCGATGAAGGAGAGAACAAAGGCTTGGAGAGACAAAAGACATTCACGGATGGAGGAACTAGACAAAGGGAGACTGAGCTGGAAATAGCAGAGACAGAAAAAGATACAATTGGAGGGGAACAGGGAAGATAAAGAGGTGAATATAAGATATTAAGGAATGAGAGAGACAAAATTATCAAGGGTGGGAACAAGGGCATCACATGAGTGAGGTTTTCACAGTTGGCCACCCACCTGCATCCCCCTCCGGACTAAAATAGACTGAGCCCTTTTCCAGGCCAGACACTAATCTTCACAGGTATTCCCAGGACTGGGACTGTGAACCAGAGAGGGATGGTGCGGCAGGAGCAAAACCCCTTCAAACCTGCCTGTGCTTGAGAGACAGACAGGACCGGTGGAGAAATCTCATGATTAAAGCCTGTTCTATCATAAAAAGAGACTAAAGACAGAAAGAGACAGGGATCCAAAAGTCGAAGACCACTAGTGAAAATACTTCTGCTTCGCATTTTTCTCATTTAACACAATTACAGACTGTTATCAACATGAAATGTTTAATTTTCTATTATTTTCTTTTATAATTTTATTTGATTTAAAATAGCACATATACAATAATAACAAACAAGAAATGTAAAAACAAGCCAATCTGAATTGCTTATTGCTATTTTTTTAATAGATAATTTAAAAAGTGCTCCATTTAAAATAGTGATAATAGTACAACAAAAACAAATGATTAAAATAGAATAGAGAATTTGCTTATAATGAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000066_00438633_00446467.mRNA True 1406 mRNA 0.43 3 438001 446701

Neighbor

gene id symbol gene type direction distance location
CI01000066_00409321_00410208 NA coding downstream 27148 409022 ~ 410853 (-)
CI01000066_00250654_00271679 NA coding downstream 166096 250604 ~ 271905 (-)
CI01000066_00196094_00242947 WNK1B, WNK1 coding downstream 192773 195852 ~ 245228 (-)
CI01000066_00179779_00180183 NA coding downstream 257712 179721 ~ 180289 (-)
CI01000066_00173913_00174335 NA coding downstream 263242 173772 ~ 174759 (-)
CI01000066_00535081_00543543 NA coding upstream 88207 534908 ~ 543917 (-)
CI01000066_00597946_00601637 FBXL13, FBXL14B, FBXL14, FBXL14.S, FBXL14A coding upstream 151009 597710 ~ 601637 (-)
CI01000066_00642830_00643160 NA coding upstream 195817 642518 ~ 643249 (-)
CI01000066_00675433_00675726 NA coding upstream 228180 674881 ~ 676211 (-)
CI01000066_00679999_00685380 NA coding upstream 232951 679652 ~ 685380 (-)
G271623 NA non-coding downstream 136281 300957 ~ 301720 (-)
G271614 NA non-coding downstream 160736 277033 ~ 277265 (-)
G271583 NA non-coding downstream 250122 186928 ~ 187879 (-)
G271560 NA non-coding downstream 397787 39155 ~ 40214 (-)
G271558 NA non-coding downstream 405219 32431 ~ 32782 (-)
G271745 NA non-coding upstream 8934 455635 ~ 456410 (-)
G271620 NA non-coding upstream 71608 518309 ~ 520950 (-)
G271802 NA non-coding upstream 93666 540367 ~ 566360 (-)
G271818 NA non-coding upstream 121580 568281 ~ 569175 (-)
G271788 NA non-coding upstream 173006 619707 ~ 623728 (-)
CI01000066_01823227_01826380 NA other upstream 1376328 1823029 ~ 1826817 (-)
CI01000066_01843043_01848783 NA other upstream 1394978 1842554 ~ 1849466 (-)
G272221 NA other upstream 1512401 1959102 ~ 1985228 (-)

Expression


Co-expression Network