CI01000066_00451123_00488660


Basic Information

Item Value
gene id CI01000066_00451123_00488660
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000066
NCBI id null
chromosome length 3719324
location 449063 ~ 488712 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000066_00451123_00488660.mRNA
GTATAAGTGGCAGATTATGCAGTGCCATGAGCAGCAGACTCAATGAAGCAGATGTGGTGTGAGACCTGTTTGTGTGTGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAGCAGAACTGCAGTCGTCTCAACAATAGGAGCTGACACCCAGGTGATTAGCAGGCATTATGGTTTGCTGGAGGGGTTGAGGTGGGAGATTTGAGGGGGGGTTTGGGCTCTCATTAATCTCTGTCTGTCACGGGTGCCCCCACACCAACTACCCTCCACACCCAGCCTGTCCGTCACACTACGCCGTGGCCTCTTTCCATGTTTTTCTTTGGATAGTTAAAGAATTACATGCACACACACAAAGTGCACCACACCTATGAGAGGTCTGCGCCTATCACCCCGTCTCTGGGGACATATGAGTAATCATTGTACATTTTCTGCCTGCGTTTCCTCTGTTGTCTTATCTGCAGCGCACATGACAGCTACTGATGTGTATTTTTCCATCTCTTAAAGAGCATTGTGGAAAGATTGACATTGTGGTTGGTTATTTTGTCATTGTGGTGTTTGCATGCTTGTACTTGGCGATTTGAACAAAGCCCTAATGGGAAGTATTTAACTTTGGCAAGTAATTCATCCTGTACTGTTCGTGGTAAAACTGTGAATGATGCCTCAAATCATGCAGCTTAATAAGGAGAGGTGTGCTGTTCATTTTCTAAGTGATTAGATTTATGGTTTTTATTCTGGTAGACAATAAAATGGGGGGAAAATTCAATTTGTATTGTCCAATATATGTTTTTTACATATATATTTTTTTATATATTTCCTTGTAAAAAAAAAAAAAAAGGCTTATATATTATTATATTATATTATATTATATTAATCTGGGGGAAAAGGTTTCAGGATATTTTAGGGATGTCAAAACAGATAAATGTTTAACATTTTTTATACATATACACATACATACATACACACACACACACACACACACACACACACACTCATAAACATGTAGCTGAATGTAAAAAGGCCTGTATAGATTTCCATGTAAAGCAGGTCCTGTAGAACGGTGGTTTTCTGGAGGGAAGGATCCAGACCGCTCCCTGCTGAGAGGTGAAACTTGACTCCCAATGCTACGTACTGTACGGCCTGCCCGTCTTGTACTCTGAGACCCCATCAGCACGGCATGCTGGGTAGGACGCAGAGCAGCTAACGTAGCTTGTCAGTGCTGGTGAGGGTAAAAGGCAGAGGCCGGAGATGGATGTAGGGAAAGAGGGAGCCTTTTTGTCTTTTTTTTTTTTTTTTTTTTTTTTTTTCCCTTCCCAGGGCAGACACAAAATATGTTTTACACAGTGGCTTTTGCATCCACTAAATATGAGTGTGTGTGCATGTCTGTGTGTATATTTGAGAGAGTGTGGAAGAGTGTGTTTTGTCAGCTCTTACAGGCACAGCTGGGACTTGTTAGGGGCCCAGGAAACTGAGGTTTGTGGAGCAGGAGGAATAGCAGGGCGAAGGGGGGCCGCCGGCCGTGACAGGCTCGCTCTGAACCTCTCTGGCACTGACTAGCTCCTCCATACTGCGCAACCCATTCTTAATGGATACGTACATGAGACCTGTGCGGTCAAAGTCACAACCCATTATCTGCCTCGCAGGTGAAGCCTTGTGTCTCCCGTGGTACTTATTTCTCCATTTGTAGATGAGGGTCAAGTATCTCTTCCCACTGTTTGCCCACAGACGTCACATAGCCTGTTAGGAAAGATTCCCCTCCGCACCCCAGCTGTCAGATTGTATGTAAACACGCAAGCAGTAGGACTCATGGGACATTTTAGCCATCAGGCCCTCGTGACTGATGCCGTGCGGCCACATCTGGCTCGTTTGATGGACGGCTTGAGCGTGAGGTGGTGGAATAGCAAAGAGGACAGATTTTGTTGGTAATTTGAGGCCCACCTGACCTCTTCCTGCCCCCTTTCGCACTAAGAACGTCTCGGTGTGAATTGTCCGTCCATCATAATGCATTATGAATCAGATCACATAGTCTTGCATAAGGCCAAATCACATGCACGGCAGTCTGAGAGAGACGATCAGGACCCAGAGGGGATATCATGCACTAAAAAGTGCTGCTCGGGGACTTGATGGTGAAATCCGACAGATTGCCGCAAAACAAGCCAAGGTCCAACCTGTTAAAAAGGGGGCAGGCGGTGGTGGGCAACCGCGCCAGGCGTTTATTGGCATCTGTAATGTGGTCGACCAGGCTGGTGCCAAGTGCTGTGTCTCCATCCTGTACCACCCCGATCGGCATGGCAGTTTGTCTGCTGCTAACATGCGCGCTCCAAACCATCTGTTCAGCCTCACTCCGTGTCGCCACACGGGTGACATCATGACATGCGGTCTAGAGAGCGGAAAAATTCCTCCTGTCCACCGTCGGAGAGGCCGGACAGCTGTAGCCCCCTTAAAGAGGAGAGTGGGGAAAACAGAGGGTGGGGAAAGAAAACAAGTGAAAGAGGGAGAGAAAAGAAGCCGTCAGCGAGGGCCTGGCAGGCGGAGTTGTCCTGCCAGGCCTGTTTGTGGAGAAACTTCTGGAACACGTCCTTCAGTCGGAGGCCTTGAATCTGTTACAGACCGCCTTCTCCCCGGACTTAGACCTGAGAAACAGACAGTGCAGTTTGTCTGCACCCAGCCATGTTTGAAAAATTTACACCAGGCAAACTACTACTACTTTTATCCCAGTAATTTGCCAGTTCAGATCTATAACAAATATACCCTCTACAAACAGATTGGGGTAAAATCAGTCATCTGGTCTTGGCCCGTGGGTTTTAAGACTACTTTTTACTCATCTGCTGGTGGAAAATCTTACAGGGTGCACAGGTGCCACTCCTTGACGAGCTTCATTTCCCAGAAAGCAAGTTCTGCCCTCCTCCCTCGTCTTCCTCCCTGGTTTTGTTTAGAGGCCCCAGCTGTGTTGCTCACCGCAACTTTCCCTGCGTTTCCCAGACAGGAGGCGCTGTTGGCAGCCATCAGCGAGAAGGACGCCAACATCGCTCTTCTAGAGCTGTCGTCCTCGAAGAAGAAGAAGACTCAAGATGAAGTGGCTTTGCTAAAGAGGGAGAAAGACCGATTGGTACATCAGCTGAAACAGCAGTTCTGCTTAGCAGTTCAAGGACAGGCTAAAGAACAAGTTCTGGTGGAATTAAACCAAGACACGTTGGGAACGAGATCCCAGAGTATGGAGATGCAAACAGGCTACAGATGTCTGGCCGCAGACCCGTCAAGAAGGGCAATTTTAGGATTATTTGACTCCTCCTCCAGCCTTCGTGATGATGACAGTGTAAAAATAGGACTGATGCCTGAGAGAGAGATGACGTTGATCAAGCGAATGTGTATTTTAGTCCCCATTCAGAGATGGAAGACGTGCCAAAGTGTCCAACTCACCCGTTCCCTCTGTAGACCTTTTGAGCCCAGTCTGTCCGGGCGTCTGAGCGTGTCTATGTTAGAAAATCAAGACGTAGAGAGGGAAGTGATATTTATCCTGACAATTTCGGAAAAAAGAGTCGCTGTGTTTTCGGAACACGAGACCTCAAAACACAAGCCGCTAAATGGCTGTTTGAATAAGGCCTGTGGGTGTCCAGCTCGTCCAACGTGTGACGTTGTGGAGGAGAGGAAATGGAGATTTTCCACTGCATCTCCGATTGTGGAGAACGTTTTACGATGTTGTTATTATTCGGGTGGTAAAGGGCAGCAACATCAAACATCAAAGTGCACAAAACCGGTAGCACAAAAATCAGTAGTTGACAGTGGAAACCTTAGAAGTTGCTGTAACATGGAGATGTCATATATCTGGCAATTCTACCTACACTCCTCAGTTCTCTTCCAGCTTTTCCAAGCAGTGAGTCTATGCTTATTCAGTCAGGGCGTTTTGGCCTTTAGCCTCCCATCTGGGATCGGCTCTTCAGAACCCCTCTGGCCCTTTGAGGAGATCCGGTTTCCACGAACGCTCACCCGCACCTCCCTCTTTCCTCACTTCTCCCCTCCGGAGCGAGTTTATCTCCTGGCGGAGGGCCTCTTCCGCTTGGAGAGTGGCAACTGTATAACACCCCTCACCTGTTTTCAAAACAAAGGCATGAGCTTGAACGTTTTTGAAAATCATCTCTGTGTTTTCATTCTCAGTGAATTAGAGGGGGTCAGCCTAAGGGGGAGGATTTACATGCTACAAGCCGGAGAGCTTAAGCCTGACTTTCCGAAACCCTCGCCCCGAATCCTTTGCACTAACCCGCTGAGCATGTGGAACAAATTGTCTCAAATGGGGTATTTTCCTCCTCGTGAGAGGAGGAGGATGGGAGAGAAAAACTGGGGGTCTGGGAGGTGGAGGGAAGAGGGTGAGAAAACCAAACAGAAGGAGCCCAACCATCACATTCTGGTCAGGGAGCAGCCGGGAAACAAGCCGAAGAATCCGGAAGGGCAGGGTGTGGGTCGACTCTCATTCAAATGTAATGTCTTATTGATACATTTCATCGCATATTCTCGTTGGCGTGTGGTGGTGGAGTCAGTTGTGATGGTCGGCTTGCCAAAAACGCAGAACCGCATGAAGTTAATGGCTGATAACTACGAGGATGACCACCTCAAGGCCTCCAATTCTGACCAGACCAATCACAAACCCTCTCCAGATCAGGTCGTTTTCAAAGTGACTCACGTACAATATGATGCCAGAGCGGGTGTTAGCATGTGGAGCAGAAAAGTAATGAAGACTCCATTGTTGTGTCACCTCTATTTGACGACCTTAGACATTACTAACCGTTTGGACGGTGCAATTCCATGGAAAACTGTGAAACAGAGTTTGGCAATCACTCACATATTCCAGGGGTCAGTGGGTACCCGTCCCGCTGGAGCAACTAAGGTGTAACCTCTTCTGAACCCGTCCCATGAGCGCAACCACCCACCATTTGCCCACATTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000066_00451123_00488660.mRNA True 4953 mRNA 0.48 19 449063 488712

Neighbor

gene id symbol gene type direction distance location
CI01000066_00419486_00436877 NA coding upstream 11512 418918 ~ 437551 (+)
CI01000066_00400218_00405333 NA coding upstream 43460 399780 ~ 405603 (+)
CI01000066_00344664_00393673 NA coding upstream 54738 344664 ~ 394325 (+)
CI01000066_00300974_00304363 NINJ2 coding upstream 144655 300236 ~ 304408 (+)
CI01000066_00273310_00276428 NA coding upstream 172565 273157 ~ 276498 (+)
CI01000066_00489175_00503984 NA coding downstream 332 489044 ~ 504016 (+)
CI01000066_00512961_00520396 NA coding downstream 23560 512272 ~ 520541 (+)
CI01000066_00549586_00551630 NA coding downstream 60649 549361 ~ 551735 (+)
CI01000066_00620105_00632826 WNT5B coding downstream 131393 620105 ~ 632826 (+)
CI01000066_00661106_00665703 ADIPOR2, MGC85478 coding downstream 172394 661106 ~ 665915 (+)
G270603 NA non-coding upstream 171401 277279 ~ 277662 (+)
G270602 NA non-coding upstream 171934 276906 ~ 277129 (+)
G270594 NA non-coding upstream 181422 265876 ~ 267641 (+)
G270587 NA non-coding upstream 191738 253654 ~ 257325 (+)
G270633 NA non-coding downstream 45565 534277 ~ 534507 (+)
G270625 NA non-coding downstream 80465 569177 ~ 577204 (+)
G270648 NA non-coding downstream 148769 637481 ~ 643950 (+)
G270650 NA non-coding downstream 182481 671193 ~ 671425 (+)
G270646 NA non-coding downstream 185116 673828 ~ 678102 (+)
G270546 NA other upstream 262386 184528 ~ 186677 (+)
CI01000066_00019553_00029834 PAHX, PHYH other upstream 428790 19447 ~ 30531 (+)
G270973 NA other downstream 1355740 1844452 ~ 1847752 (+)
CI01000066_02274624_02277624 NA other downstream 1780457 2274557 ~ 2278119 (+)
CI01000066_02296138_02305439 CMAH other downstream 1813498 2296071 ~ 2305637 (+)
G271105 NA other downstream 1941998 2430710 ~ 2439169 (+)

Expression


Co-expression Network