CI01000066_00512961_00520396


Basic Information

Item Value
gene id CI01000066_00512961_00520396
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000066
NCBI id null
chromosome length 3719324
location 512272 ~ 520541 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000066_00512961_00520396.mRNA
ATATAAATAACATATTTCTTCTCTCTTAATTTCATTTATGAACTTTATGAGCAATAAAATTGAATCCCTTCTCTGCAAGATAGTCACAGCATGTTTAGCTCTGCGTGACAACAGAAATAGATTGCTCCCATTATAATAAATTATTATATACTGCTGTTTCACAATGTCTATACATGGGCAAAGTAGTTGCATGCAAACTATGAGGAATAAACACTTGTAAACAGCATAAAATACCATTCAGAAAAATGTATTTTATGTATTTATTTAATGAACTTGCAACCTTTTTTTAATTTAATAATCACATTAAATTTTGATTAATCATACAGCCATACTAGACATAATTTTAAAAAATCTGTAAAAAATGAACTTTAATAATCCAAGATGAGTGTGCTGCACTGCTTGGTTGCTGAAAGCACAAAATTTGCCAAAATATTTAATAAATGACCACGCATGGGATGTGTAAAATGTTGTGAATGACAGGTGTTCCCACTGAGCTTTCTGTGTGAGTAACGTAATGATGTAACTGTTAACGTAGATTGCCAGCACCTTAAAGCAGCATTGTCTCTACTGACCTCAGCTTGCCCGCTCAATTCTTCTAACCCAGCTGCAAGCAGGCCGAACGTGTGGCAGCGTTAGCCACCCCCTGGCCAGTCCTTCCCTCTCCTCCAGTTCTCCACTGTCTACGCTTAATGGGGCTTACAGCAGCGGCGGTCTGCCAAGCTGCGCCCTCACGCAGGCCCATACATCAGCCCCCGATGAGGCTCATTAACCCTCCTCTCATGACTCAATACACTCCTCCTCTCTCCCTCACTCGTTCGTCTCCATCACGTCTTCACTTTTCTCCTGGCCAACGTGTCAGACTCCAGTATCCCAGGAGTGTCGTCACAGATGTCTTTATCATTAACCTTGTTAAAGTTGGTGTTCATAGGCCAGGAGAGCCAAAGAAAATACTTTTGTGGGTTTTTGTGAAATATTCCACTTTCTATGGGCTTTGGTTCAGTGGCTCGTGTTCAAATCCGAAAAGCAATTTAAAAGCAGTACAGCGCCACGAAACACTGATTGTCCAGATAGGGCCAAACAGAGGCCACGGACGGGGACCCGGGACAGTCTGGGTTCAGTGGGCTCTCAATCAGAAACAGAAGCTGCTGGAATCTGAGCTGGAGCAGTGTGAACGAGAGAGCGCCGAACTGCAGGAATACGCCAACTCTGTCCTGCAGCAGATCGCCGATCACTGCCCGGACATACTGGAGCAGAATCCTGTTTACACTCACATAAACACGGGTAAGAAGGAAGAAGGAACCGAAAGGGGGAAAAGAGCATCAGAGAAGCTCAGTATTATAAGACATGTTCACTTATTTAGTTGTCTGTCTCTGAAAGCCGTCCTGCAGGAGATGCAACTTGTTTTTTGTGGTTGCTTTGTGATCACCCCATCAGAGATAACATCAAGCTTTGATCCCAAGCATCTCACATGTACCATCATGCTTCTCTCTCATGCTCTATCATCCTCAGACCCGGGCGTCTCTGTTAGCACAGCCGGCAGGTGTATCCTTTTTCACTTTATGGTTATATGGGTCTATATCCGCTGGCATTGGGTGTCCGTTTCTGGACCGGCCGCAGGAGTGATAAGACTCAACCTCATTCAACTCGCAATAATAACTCGCGGTTGCCTCATCATGCGGATCGGCCGTTGCTTTAAAGTCCAGAGTCAACTTCCCCTGTGGATGACACTGGGCGTAACGTGCCCTCTGCTCCTCTCTCTCTATATCTCCTCATCCCTCCCTCATTCATGCCTGTGTGTAGTTTATGGCTCTGACCTGCTGTGCCGTGTTAGTCATACTCCTCTCTGCACGATAAGCTCGACAGACAAGACAAACAGCACAAGATCACAGCGAATATAATCATCTCTCTCCCACATGCTCCCATATCACCACACCACCTCTCCTCATGCCCATACTCACTAGAAAACAGCCACGTGATGTTGGGCCAAACGTTTGCTTTGCCCAAATTTGATTGACCTCTGAGTCATTCTGTGAGTCACCTATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000066_00512961_00520396.mRNA True 2043 mRNA 0.45 5 512272 520541

Neighbor

gene id symbol gene type direction distance location
CI01000066_00489175_00503984 NA coding upstream 8256 489044 ~ 504016 (+)
CI01000066_00451123_00488660 NA coding upstream 23560 449063 ~ 488712 (+)
CI01000066_00419486_00436877 NA coding upstream 74721 418918 ~ 437551 (+)
CI01000066_00400218_00405333 NA coding upstream 106669 399780 ~ 405603 (+)
CI01000066_00344664_00393673 NA coding upstream 117947 344664 ~ 394325 (+)
CI01000066_00549586_00551630 NA coding downstream 28820 549361 ~ 551735 (+)
CI01000066_00620105_00632826 WNT5B coding downstream 99564 620105 ~ 632826 (+)
CI01000066_00661106_00665703 ADIPOR2, MGC85478 coding downstream 140565 661106 ~ 665915 (+)
CI01000066_00738687_00750408 MGC115026, ST4A1, SULT4A1, SULT4A1.L coding downstream 218146 738687 ~ 750740 (+)
CI01000066_00915548_00922666 SAMM50L, SAMM50 coding downstream 395007 915548 ~ 923234 (+)
G270603 NA non-coding upstream 234610 277279 ~ 277662 (+)
G270602 NA non-coding upstream 235143 276906 ~ 277129 (+)
CI01000066_00273310_00276428 NA non-coding upstream 236128 273157 ~ 276498 (+)
G270594 NA non-coding upstream 244631 265876 ~ 267641 (+)
G270587 NA non-coding upstream 254947 253654 ~ 257325 (+)
G270633 NA non-coding downstream 13736 534277 ~ 534507 (+)
G270625 NA non-coding downstream 48636 569177 ~ 577204 (+)
G270648 NA non-coding downstream 116940 637481 ~ 643950 (+)
G270650 NA non-coding downstream 150652 671193 ~ 671425 (+)
G270646 NA non-coding downstream 153287 673828 ~ 678102 (+)
G270546 NA other upstream 325595 184528 ~ 186677 (+)
CI01000066_00019553_00029834 PAHX, PHYH other upstream 491999 19447 ~ 30531 (+)
G270973 NA other downstream 1323911 1844452 ~ 1847752 (+)
CI01000066_02274624_02277624 NA other downstream 1748628 2274557 ~ 2278119 (+)
CI01000066_02296138_02305439 CMAH other downstream 1781669 2296071 ~ 2305637 (+)
G271105 NA other downstream 1910169 2430710 ~ 2439169 (+)

Expression


Co-expression Network