CI01000066_00535081_00543543


Basic Information

Item Value
gene id CI01000066_00535081_00543543
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000066
NCBI id null
chromosome length 3719324
location 534908 ~ 543917 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000066_00535081_00543543.mRNA
ACAGCAAAAAAGTAATTTCCTAACTCAAAATGTTTGTCTTGTTTTAAGCATTAACCTCAATTCGGATACATTTCTCAGAAAACAAGACGTCATATCTTACGCAATTTAGCATCTGAAGTAATTATGTCTTGATTTAAGAATGTTTGGATATTTGTACCGGAAAGCAAGACAAATATATTATGAAAAAAAGCACGACTGCTCTCGCTTCCAAGCACTCTCGTGCACATCTCTTGTAAATATGTACATGTGAATACACAAACACACACACAAACATGCAAACACGTAGTTTGCTAATATCCAGATTACAGAGGAGACTGTAAACACTGTGGAGCCAGACTCTGGGACATAGCAAAGCTCAATTAGGGCATAAAACCATGAGAAAGAGGCACATCATCTATTCTTGCACCCTTCAACAACTTCCAGAAACCCTGCTGCGCTTCAAACCCTTCCTGCTGCCCAGGCCACACTCAAAGACCCGCCATCAAGACAACCAATTTTGCACATCATTATCTAACAGCGAGGGGGAGAGATTCACATGCATGGCTTTTATCTATTACAACACTTTGAATCTTGAGCAGGACTCCACAGACGTCATGCTAAGTCTGCATCAACAAACGTGGCACTCTAATTTCAGCATTACTTATGATGTGTTTGAGATGCGTGCAGCACTTCTGCTGATCATGGTCTCTGTGTCTGGACAACATGATGTCGATACGCTGTGCCCTTCAACGGGAGAAAGGCAGGAGGCCAAACAGGCTGTTCGGGCTCTTAACCCCAGACCTAGCACTAAAAGCAGACGACGAAGAAACTCTAGCGACTGCTTCAGTCCGCAGGCAGGGGGGTGAAAGAGTGAGTTTTGACTAGTTTGCGCGTTGCCTACTCATGGGCCTGCCCTCCCCATCTCTCCAGCTTCGAAACAGGGGAGGGAGAGAAACCACAGTCCTCCAACAGCGCGTTGCCATTTGACGAACACTTGGAATACTGTCCCAACCACTGCTCCTATTAGTCAGACAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000066_00535081_00543543.mRNA True 1018 mRNA 0.45 4 534908 543917

Neighbor

gene id symbol gene type direction distance location
CI01000066_00438633_00446467 NA coding downstream 88207 438001 ~ 446701 (-)
CI01000066_00409321_00410208 NA coding downstream 124055 409022 ~ 410853 (-)
CI01000066_00250654_00271679 NA coding downstream 263003 250604 ~ 271905 (-)
CI01000066_00196094_00242947 WNK1B, WNK1 coding downstream 289680 195852 ~ 245228 (-)
CI01000066_00179779_00180183 NA coding downstream 354619 179721 ~ 180289 (-)
CI01000066_00597946_00601637 FBXL13, FBXL14B, FBXL14, FBXL14.S, FBXL14A coding upstream 53793 597710 ~ 601637 (-)
CI01000066_00642830_00643160 NA coding upstream 98601 642518 ~ 643249 (-)
CI01000066_00675433_00675726 NA coding upstream 130964 674881 ~ 676211 (-)
CI01000066_00679999_00685380 NA coding upstream 135735 679652 ~ 685380 (-)
CI01000066_00711133_00728657 TTLL12 coding upstream 167216 711133 ~ 728657 (-)
G271620 NA non-coding downstream 13958 518309 ~ 520950 (-)
G271745 NA non-coding downstream 78498 455635 ~ 456410 (-)
G271623 NA non-coding downstream 233188 300957 ~ 301720 (-)
G271614 NA non-coding downstream 257643 277033 ~ 277265 (-)
G271583 NA non-coding downstream 347029 186928 ~ 187879 (-)
G271818 NA non-coding upstream 24364 568281 ~ 569175 (-)
G271788 NA non-coding upstream 75790 619707 ~ 623728 (-)
G271838 NA non-coding upstream 84344 628261 ~ 629754 (-)
G271774 NA non-coding upstream 105542 649459 ~ 662102 (-)
G271849 NA non-coding upstream 111083 655000 ~ 656203 (-)
CI01000066_01823227_01826380 NA other upstream 1279112 1823029 ~ 1826817 (-)
CI01000066_01843043_01848783 NA other upstream 1297762 1842554 ~ 1849466 (-)
G272221 NA other upstream 1415185 1959102 ~ 1985228 (-)

Expression


Co-expression Network