CI01000066_00597946_00601637 (FBXL13, FBXL14B, FBXL14, FBXL14.S, FBXL14A)


Basic Information

Item Value
gene id CI01000066_00597946_00601637
gene name FBXL13, FBXL14B, FBXL14, FBXL14.S, FBXL14A
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000066
NCBI id null
chromosome length 3719324
location 597710 ~ 601637 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000066_00597946_00601637.mRNA
TACCTTCTGCAAATGCTCCCGTCATATCGGCTAACAATGCCAAAGAGCCCACAGAGGGGGGCCTGAGGCCCAAAGACGGGGAAATATGCAAAAGGTGGAATAAAAACTACCTTACCCGCTCTGTGCTGGCGGCCCTGCCAAGTCAGTTTGAAAAGATCAGACAAAGGCAGCAGGAAGCCCCTCGGCTTGGCAATGAGTGCGAGCGGAGCAGAAACGCGAAACGAAACCTCACTCTTTTATCTGATAGCGGACTGAATTTGTTTTCTCCCGAGGGGACTGCGAGACGCGACGGTGACCGTTGGTGGGGGTTTGCCGCCGTTTGTTTTCTTGAGCGCGTGTGGAAGATGGAGACGCACATCTCGTGTCTCTTCCCGGAGATTTTAGCTATGATTTTCAGCTACTTGGACGTGAGGGACAAAGGCAGGGTGGCCCAAGTGTGCACGGCGTGGAGGGACGCGTCCTACCACAAGTCCGTGTGGAGGGGGGTGGAAGCCAAGCTGCATCTGAGGCGGGCGAACCCGTCCCTGTTCCCCAGCCTCCAGGCGCGAGGCATCCGGCGCGTGCAGATCCTCAGCCTGCGGCGCAGCCTCAGCTACGTGATCCAGGGGATGCCCAACATCGAGAGCTTGAATCTGAGCGGCTGCTATAACTTAACGGATAACGGCCTGGGGCACGCGTTCGTGCAGGAGATCCCTTCCCTGAGGGTGCTCAATCTGAGCCTTTGCAAGCAGATCACGGATTCCAGTTTGGGCAGAATAGCGCAGTATCTGAAAAACTTGGAGGTGTTGGAACTGGGCGGCTGCAGTAATATCACGAACACGGGCTTGTTGCTCATTGCGTGGGGTTTGCACAGACTTAAAAGTCTTAATCTGAGGAGCTGCCGGCATGTGTCCGACGTGGGCATCGGGCACTTGGCCGGCATGACCCGGAGCGCGGCGGAGGGCTGCCTCAGTCTGGAATACCTGACCTTGCAGGACTGCCAGAAGTTGACGGACTTGTCCCTCAAGCATATTTCAAAAGGTCTGACTAAGCTCAAAGTGCTCAACCTGAGTTTCTGCGGGGGCATCTCGGACGCTGGCATGATCCACCTCTCTCACATGACGAGCCTGTGGAGCCTTAATCTGCGCTCGTGCGACAACATCAGCGACACGGGCATCATGCACCTCGCCATGGGCACACTGAGACTCTCCGGGCTCGACGTGTCGTTTTGCGACAAGATAGGCGACCAGAGCCTGGCTTATATCGCGCAGGGCCTGTACCAGCTCAAGTCGCTGTCGCTGTGCTCGTGCCACATCAGTGACGATGGCATCAACAGGATGGTGCGCCAAATGCACGAGCTGAGGACGCTGAACATCGGTCAGTGCGTGCGGATTACAGACAAAGGACTGGAGCTGATCGCAGATCACTTGACGCAGCTGACCGGCATCGATCTATATGGATGTACGAAAATCACTAAGAGGGGACTGGAGAGGATCACGCAGCTCCCCTGCCTTAAAGTTTTGAACCTGGGCCTTTGGCAGATGACTGAAAATAGCCAACAAAAAGCAAAAGGTTTCAAAAGAAGTCTATGGGTAGGGCTGAAACAGGGCACATCGTGTTATAAAACAATCTGTCTGTTTTAAATACATTAATATTCAACTTTACATATAAAAGACACGGTCGCAACGAGGGTAACACGCAAAATGCATGTCAGGCCTATATATGTACCATGATGTATCGACCTGCAACATGTATTGAGTCCTGCTGAGAAGCTACTGTGTTCTAATGTACTGTAAATGTATTTGTAAAAAGAATCCCAAATTAAAATGTTTTATATTCTTACAGTAAAAACATTAAAGTTGATATTTATATAAATAAA

Function

symbol description
fbxl14a Predicted to enable ubiquitin-protein transferase activity. Predicted to be involved in SCF-dependent proteasomal ubiquitin-dependent protein catabolic process. Predicted to act upstream of or within protein ubiquitination. Part of SCF ubiquitin ligase complex. Orthologous to human FBXL14 (F-box and leucine rich repeat protein 14).
fbxl14b Predicted to enable ubiquitin-protein transferase activity. Predicted to be involved in SCF-dependent proteasomal ubiquitin-dependent protein catabolic process. Predicted to act upstream of or within protein ubiquitination. Part of SCF ubiquitin ligase complex. Is expressed in hindbrain and midbrain. Orthologous to human FBXL14 (F-box and leucine rich repeat protein 14).
fbxl13 Orthologous to human FBXL13 (F-box and leucine rich repeat protein 13).
fbxl14 Enables ubiquitin-protein transferase activity. Involved in ubiquitin-dependent protein catabolic process. Located in cytoplasm.

GO:

id name namespace
GO:0005737 cytoplasm cellular_component

KEGG:

id description
K10280 FBXL14; F-box and leucine-rich repeat protein 14

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000066_00597946_00601637.mRNA True 1858 mRNA 0.52 5 597710 601637

Neighbor

gene id symbol gene type direction distance location
CI01000066_00535081_00543543 NA coding downstream 53793 534908 ~ 543917 (-)
CI01000066_00438633_00446467 NA coding downstream 151009 438001 ~ 446701 (-)
CI01000066_00409321_00410208 NA coding downstream 186857 409022 ~ 410853 (-)
CI01000066_00250654_00271679 NA coding downstream 325805 250604 ~ 271905 (-)
CI01000066_00196094_00242947 WNK1B, WNK1 coding downstream 352482 195852 ~ 245228 (-)
CI01000066_00642830_00643160 NA coding upstream 40881 642518 ~ 643249 (-)
CI01000066_00675433_00675726 NA coding upstream 73244 674881 ~ 676211 (-)
CI01000066_00679999_00685380 NA coding upstream 78015 679652 ~ 685380 (-)
CI01000066_00711133_00728657 TTLL12 coding upstream 109496 711133 ~ 728657 (-)
CI01000066_00730057_00737661 PNPLA3 coding upstream 128078 729715 ~ 737661 (-)
G271818 NA non-coding downstream 28535 568281 ~ 569175 (-)
G271802 NA non-coding downstream 31350 540367 ~ 566360 (-)
G271620 NA non-coding downstream 76760 518309 ~ 520950 (-)
G271745 NA non-coding downstream 141300 455635 ~ 456410 (-)
G271623 NA non-coding downstream 295990 300957 ~ 301720 (-)
G271788 NA non-coding upstream 18070 619707 ~ 623728 (-)
G271838 NA non-coding upstream 26624 628261 ~ 629754 (-)
G271774 NA non-coding upstream 47822 649459 ~ 662102 (-)
G271849 NA non-coding upstream 53363 655000 ~ 656203 (-)
G271772 NA non-coding upstream 62900 664537 ~ 666836 (-)
CI01000066_01823227_01826380 NA other upstream 1221392 1823029 ~ 1826817 (-)
CI01000066_01843043_01848783 NA other upstream 1240042 1842554 ~ 1849466 (-)
G272221 NA other upstream 1357465 1959102 ~ 1985228 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_028519 fbxl14b coding NC_007115.7 CM002888.2 8609517 ~ 8611841 (-)
bowfin (Amia calva) AMCG00006905 fbxl14b,LOC106590767,LOC107580311,LOC107656333 coding CM030134.1 CM030134.1 25336345 ~ 25340058 (+)