XLOC_010428


Basic Information

Item Value
gene id XLOC_010428
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 6648030 ~ 6651719 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00022103
cccccttcaagtaaagtcttatcaaaactttatttttaatttttttataagtaTTTCTGAGTTTTGAGTGTGCTTTGTGATATTAATCTGTATTAATACTAAACCAACACCATACCTTCAGATTTCCCTTTGTGGTGAAGGCTCTGCCACAGATGGAGCAGCCGAATGGTTTCTCGCCTGTATGAGTGCGCTCATGGATCTGAAGAGCACTGGCTGATGAAAAATTCTTCCCACAGGAGTGGCAGTTGTGTTGTTTGGGGGTCCGCCGAGGTGGGGGCGGTGCCAGCATTGGAGTGATGTTGGAGCTTATTGTTGTCTGAGCGGTTGCAGTAGGTACCTGCGGACCAACTGGTAAGTGGGGCCCCTCACACAAGGCCGGCGGTTTACTGTGTCCATTCTCAAATTTCACTGTGCTTGATTCTGAGCTTATATTGCTGGGAGTGCTTAAACCTAAAAGAGGgaaaacatttcatttatttgattcGATTCATTTTGGTGATCACATCAAATCACAGTTTCTGTCATTTTTGatcttgtgttcaacataaaTTTATTTAAGAAATACTACCTCTGTCTCTTCCCAGGAACAGCAAACTGAAGGGATTCTCATCTTTGACAAATGACCTGGTGGGCTGTGTGGCAGTGAGATCTAATGCGCCCGTGTTTTCCGATCCAGGAGAATGGATGTCCAACTGTTCAGACTTCACCATTGCATGCGCCGAGGTTGAGGTCAAAGCCTCATCTTTGCTGCTGCTATTTGCCTGAGGAGACTTAGAGCGATGACTCTCGGACTGACTGTAGGTAGGCGATAAAGCCAGCATAGAGCCAGACGATTCAGACTGTGCTGGACTCCCTACACTGTGGTTCTCCAAATCTACTAGAGTGGAAGATAAGTCATTCTTGAGCATGTCTCCATTTACCCCATCAACTCCACTCCCGTTTTCTGTAGGCTTTACGCTGAAAGAGTGGGTAATGTTAACAGCTGGGTCACTAAGCTTCATCTCATTCTCAAAAGCACCAATGCTTGAGATAAGAGAAGTTGGGGGTGAAGTGCTAGGAGACATCTCTGAGTATAGATGGAGCTGTTTGTGCAGGTCCATGTTCTCGTCTTTTAGACCTGTTTCATCTTCCAGTGCTTGGTCCATCTCATCAATTAGCTCATCGTCGTAGTTGCTCATGGCATCTAAGCTCTTTTCATCAAAGGACAGATCTGCGTCTGTGTCCTGAAAAGTATCAGGCAGAGGTGTGTTAGGAATCTGTCCACCCATATGCATGCGAATGTGTTGCTGCAGAACTACGGCATTAGTAAACTTTTTCTGGCATATAGGACAAGAGTGCTGTACCCGGAGAGGGGGCTTTGATCTGTGAACCCCAAAGTGTGTCTTCAGGTTACCCTTGGTTGTGAAAGCACGGccacatattttacatttaaagggtCTTTCTCCTGTGTGGATGCGATAATGCATCTTCAGGGCACTCTGACAACTTAGGACACGATGGCAGATGACACACTGGTTGGGATCTGTCATCTTCTTGTCAATATTCTCCACCAGTTGCTGTAGTTTTGAGGTCTCTGATGTTTGCATAGAGTCCAGGAGGCCACCAAAAGGAAATTTGGGCTTGAATTGATTTGACGATATTTGTAGAGAGGGATGAGAGACTGCAGATGAAGAATTCACTGGATCTGTGAGCTGTGTTCTGGTGCTACATGTGGTTGTAACTATGGTTGTAGAGATCACTTGAGATATGGAAGTGGTTGATATGCTTGTTTCACCAGGCCTGGTGGTGGAGTTGGGTGGTAGATGAAGTGCTTCAGGTTTGAGAACTGGAGGGGTGTTACTTGCCAAATTAGGTTGTGGTGAACTGGAAATTTGTGCAATACTGGTCTCAGTAATTAGGTGATTAGGAGACAAAGATGTACACTCGCTTGATGGCGGCGATGGCCTTTGAGGTGACCTATTTAAAGGGGAAAAACTAGTTGAATCTCCATAGCTTTCTATAATGCTGGGTATAGTAGGAGGGAGTTGCAGTGCTACTGATGTTGGGATAGTGGGCAAAATAGGTTTACTGTCCAGCCATGTTGTAACAGGTTTTTCTGGGGGCAACGACATGCCGTAAGGTATACCTGAGCTTGTTGGAACATTGTCCAGATACTCGGGCACTGGATATGGGTTCATTTGGATATGCGGATACTTTTCTTTGTGTCTTTGAAAATGAACCTTCAAGTTGCCCTTGGTTGAGAAGCGATTACCACAAATGTTGCATTTGAAAGGCCTTTCGCCAGTATGGGAACGCAGGTGAATTTGCAGCGCACTGTCACTTCCAAACACCTTGGCACAAAATCTGCACTTGTGTTTAAAAAACGGATCTTCTGAGCTGGGTTTGGTGTCAAACACAGATACATTTGGAGGCTTTGCTTTGCGGTGCTTCATAAGGGCGGAGAGGGGATCAAGAGCATTGGTTGTTGCTGCAATACTGGCTAGAGGATTAGGGAAGATAACACTGTTGGATGAGCTGTGAGGTACAAGTGGAAGGCTGGAGGGGGATGTAAGCAATCTTCCATGAGTCAGCGTTAGAGGACTAGGTGTGTTTCTTGGAAGTGAAATACCACAATTTATTTCTCCCCCAGTTCCTGTGCTACTGCTAGTGCAGCTACTGCTGCTAATTGACACTGAGCATGGTGGCATTTGTGGGGAAACACCATTACTGGTTGTTGGGTATAAAGAATTTATTGCAATATTGCTTTTCATCCCAGAACTTGCTAGTTGGCCACCCGCCGGAGGAACACTGGTACAGGCTACATCCAGAGCTGAAGATACTGCCACTGAAGCCTGCACATTTAAACTGTTGTTCATATGAAGCTGATTTATAGGAGGTGTAATGAAGCCACGCAGATGAAGCTGCCCAGGCATTGCAGGTATGCTAGAGGATGAGGGTACTTGTAAGGCAGCATTTATGCTGTGGTCTACTTTATGACTGACAGCGGTCTGTGTGGGAGCCTGATTGTTTATTAGTGCCACCTGGCTCCGAATCTGCTCGATCAATTTAAGTTGACGCAGCTGTTGTTGCTGCAAGGCCATAAGTTGATCCAGAATCATTGGGATAGCCATAGTTGACACTTCACTAGCTAGTGCTCCCCGGGCACCCTGAGAGAACTGAGCCACAGCCACACGGGTCCCATGCAGTGTTTCCAGTGTGACATTAGTGCTGGGTATAGAGTATCCTGCCCCAGAAGACTGCTTGTGATCCTCAAGTGGAGTACAGCGCCCGATTCCAGCATCATCTCTGCTCCTTCATCACCTTCGGTGGGCATGTGGCTTACCTCTACTGCATCCTCGCTGTTTGCTGGATCGCTTACACAGCTGGGCACAGGTGATGGCTCAGGTAGGTAGTCCTGTGCCGGATCTGATGTCACTTCATTGTCACTGATAATTAACACGAGTGGATTCTTGGTACAGGTCTTCAGATGTTCACAGAAATCAGACCACTTAAAAAATTCCGCACAACACTTTTCACACACATGGGTCTCTTCGCTCCCGCTGCGGCTCTCATTTCCGCTGTCTGAATCATCCACTCCTTCACCTGAGACT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00022103 True 3590 lncRNA 0.46 2 6648030 6651719

Neighbor

gene id symbol gene type direction distance location
XLOC_010427 NA coding downstream 12734 6605385 ~ 6635296 (-)
XLOC_010426 NA coding downstream 56860 6588022 ~ 6591170 (-)
XLOC_010425 NA coding downstream 91529 6512346 ~ 6556501 (-)
XLOC_010424 NA coding downstream 163803 6476016 ~ 6484227 (-)
XLOC_010423 mboat1 coding downstream 223212 6395311 ~ 6424818 (-)
XLOC_010429 mbpb coding upstream 151751 6803470 ~ 6849781 (-)
XLOC_010430 AL845419.1 coding upstream 176833 6828552 ~ 6829635 (-)
XLOC_010431 pmvk coding upstream 285467 6937186 ~ 6944927 (-)
XLOC_010432 si:ch73-341k19.1 coding upstream 550363 7202082 ~ 7239508 (-)
XLOC_010433 foxo6a coding upstream 663425 7315144 ~ 7362806 (-)
XLOC_010626 CR392024.2 misc upstream 14243393 20895112 ~ 20895175 (-)
XLOC_010421 NA non-coding downstream 261388 6383530 ~ 6386642 (-)
XLOC_010436 NA non-coding upstream 856382 7508101 ~ 7621115 (-)
XLOC_010438 BX511173.1 non-coding upstream 1042162 7693881 ~ 7696216 (-)
XLOC_010441 NA non-coding upstream 1182500 7834219 ~ 7881277 (-)
XLOC_010442 CU856516.1 non-coding upstream 1316301 7968020 ~ 7984901 (-)

Expression


Co-expression Network