CI01000066_00788981_00792403


Basic Information

Item Value
gene id CI01000066_00788981_00792403
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000066
NCBI id null
chromosome length 3719324
location 788414 ~ 792768 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000066_00788981_00792403.mRNA
ACTCTTCAATATTATTATTTTTTTAATAAATGTAACATTATAATGATCTGTTTAATAATTAATATATTTAAATGTTTCAAATGAATCTAAATTAAAACATTGTTGACTGCCCTAATTTTAAGCGTTTTCTTTGTTTTGTTTAAATGACTTTAAAACCAAGAAGAACCCTCTGCCAATCGAGTGCATTGGCAGTAGACTGAACAAATGCACAAATGGTAATCCTCTATCTGTAGCGCCCACTTACCAGCCTTTTCGATCAGTTTGGACTCCTAGGGAAGCGTTACATCACTTAATTAATATTCATGAGCCAAGCTTTTCAAATCGTCCCTACGCCCCTGCTTTTTTGGACATTCGACGGCAGCGAGATGACAGGAAGTGATGGGAGGCAGCCATGGTACTACGGCTGGGGTTTTAATCTACCACGAGGACAAGCTCTGCTGGACAAGTGGAATCAGATCCCAGATTCCACGGATATTCTTCTCACACACTGCCCTCCTCTGGGTTTCTTGGACTGGGTGCCCAGGAAGATGCAACGTGTTGGCTGTATGGAACTGTTAAACACCGTCCAGAGGAGAGTTCAGCCCAAACTACATGTATTTGGACACATTCATGAAGGTTACGGTATGATGACAGATGGAACCACCACGTTTGTTAATGCCTCGGCGTGCACGGTGAACTTCCAGCCTATGAACCCGCCAATCGTTTTCGACTTGCCCAATCCCAGGAGCTCATGATTGAACTGAGACCCGCCCACCGCCACCTTCTTTCAATCAGGGTCCCTTTCTTGAGCATATACGGATGCTGCGTAGTGTATATAGAGCGAGCGAGAGACTCTAATTTGGATATTCCCAAGGATATTTTCATCCATTTTTGTGCCATGTGCCGCCCTCAGACACAAAATACTGACACAGATGTTTGAACTCTTTTTCTGAACTTGACTCTTGTGTTGCACTTGAATCGGCGTGACAATCGCGTGTACTTAAGGTCATGGAAGCCAAACTTTCTCCTCATTGGCTGGCACTTATTTAAGGAATTTAAACCTTGTAGCCTCAATGGACCTCTGACTCGGGAAAAAAAAATCTTTTTTTCTTTTGCTCTGGAGTCACTCTTGAAAGTTACAGGATGTGCCCAGAAGAAACAGTGCTTTGGTGCAAACAAGTTTGTTCAGGGTCTTTACCATTTCCCTCTTTCTCTCTCTCTCAGTCTCAGTCTCTCATTCTGCTTTTTCCTATCTGCTCTGTTGTTATATGTTACTCTTTTGAACTTGAGGCCATGTTGGATTATACACTGGGAGAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000066_00788981_00792403.mRNA True 1301 mRNA 0.43 4 788414 792768

Neighbor

gene id symbol gene type direction distance location
CI01000066_00730057_00737661 PNPLA3 coding downstream 50753 729715 ~ 737661 (-)
CI01000066_00711133_00728657 TTLL12 coding downstream 59757 711133 ~ 728657 (-)
CI01000066_00679999_00685380 NA coding downstream 103034 679652 ~ 685380 (-)
CI01000066_00675433_00675726 NA coding downstream 112203 674881 ~ 676211 (-)
CI01000066_00642830_00643160 NA coding downstream 145165 642518 ~ 643249 (-)
CI01000066_00805568_00827944 MPPED1 coding upstream 11729 804497 ~ 827944 (-)
CI01000066_00832790_00856736 SCUBE2, SCUBE1 coding upstream 39538 832306 ~ 857910 (-)
CI01000066_00858315_00871460 SCUBE1 coding upstream 65510 858278 ~ 871541 (-)
CI01000066_00885041_00912917 SCUBE1 coding upstream 91776 884544 ~ 912917 (-)
CI01000066_00938534_00939532 NA coding upstream 144583 937351 ~ 939532 (-)
G271786 NA non-coding downstream 35524 745936 ~ 752890 (-)
G271772 NA non-coding downstream 121578 664537 ~ 666836 (-)
G271774 NA non-coding downstream 126312 649459 ~ 662102 (-)
G271849 NA non-coding downstream 132211 655000 ~ 656203 (-)
G271838 NA non-coding downstream 158660 628261 ~ 629754 (-)
G271889 NA non-coding upstream 173452 966220 ~ 966453 (-)
G271890 NA non-coding upstream 174334 967102 ~ 967354 (-)
G271891 NA non-coding upstream 229265 1022033 ~ 1022246 (-)
G271896 NA non-coding upstream 246097 1038865 ~ 1039137 (-)
CI01000066_01823227_01826380 NA other upstream 1030261 1823029 ~ 1826817 (-)
CI01000066_01843043_01848783 NA other upstream 1048911 1842554 ~ 1849466 (-)
G272221 NA other upstream 1166334 1959102 ~ 1985228 (-)

Expression


Co-expression Network