CI01000066_01562872_01567304


Basic Information

Item Value
gene id CI01000066_01562872_01567304
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000066
NCBI id null
chromosome length 3719324
location 1561842 ~ 1567485 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000066_01562872_01567304.mRNA
AAGCGCCAAGAATGCCTGGAGAGTTTGGAATAACAGGTGGTTTTGTGTTGCGTGCATTGATAATGAACTTTACAGTGCATGACTCACACTGTTTTCATACCCAGAAAACATCTAATTAAAGCCTAAACACCTTTTTAACTTCCTAAGTTTATAATAAATCACCAAAGTTCTTAGAATAAACATGTTTCCATGCAAAACTACAACACTTTTCAAAATCGACTATATTATTCTTTCTTCAATCAGACCAATAAACCAGAAGAAACACTATTATAAGAAGTCACAACTACAAGCTGAGAGCCCATTAATTCTACATTCACCACAACAAAAGCTGATAAAGCACTTGATATCATCTGCGCTACTGACAAATGAGTTAGATGAGCGTGAGCATCAGAAAAACACCAAAAGGCTCATCGGACAAGACAATCAAAAGGCGATCTGCTTTTTATTTTTAGCTGAGATTTTGCAGGGGATTTCTGGGCACACCTATAATGACTGCAACTCATCACGCTTGCCAAATTTCATAACTCTGTTTATGTCTGCAAGGAATGCCAAGGGAACAAGGAAAATATACCGTAATGTATATTATGAAAGCCAGGCGTGCCTGAACGACACTACTTGTGTGAGACAGGCCAACAATAACACAAGAGCCCCTCAAGGACTCTTACAAGCTGCTTTCATTGGAAAGCGTGACCGATGCCTTCCAGCAATTTCCATCCCAACGTCATAAAGCTCTGCTGGGATAGTAGCTTATGACTGACAGCTTGGTTTCAAAGTTCAAAGTTTTCACTGATCAAGTAGGGCCATTCTAGACCTTCAAACATACTTCACAATATTCCCAAGAAGGTGTCTGTGACTTGCTTGGGATTTATGGGTAAACATAGCTTCAAAGATTACTGATAACATAGGATATGAGCTGAAACATAAAAACAGGGTGTGGTTTGTTTTGCTTGCAACTGAAGGCAACTCTATACAGTGAAAAAAGGTCTGTTGCTTTTCTCGGAGAGAAGATTTCTCGGAGAGAAGACTTAGCCCTTTACAAACTAAAAAGACTCATCCTTCATGCACAACGCAGAATTAAATATGATCCTGGGCTGATTCACAAAGAGAGGAAGTGGAGCTGTCTGACTCACCAAGGCGACCCGATTGATCATAACAAACCTGTCAGGCCAGATGGGGAGTACAGGGCCTTCACTGAGCCCAGAGAAAAATGAAATACAACCCTCACTGTATGACGTCCCAAGTCATAATTCTGAAGAAATCTGCACACTCACCACGGCTGTGGGCAACTGTGAGAAACTGAAGAGGGTTTTTCAAACTTTGTGGCTGGCGCTCATCTGCTTTTGATTGATGAGATGCCACACAAAGCTGAAATATGAAATCACAAACCAGAAAATATCCAGCTAAAACGCTGAATCTGATATACTTGGTAATATATAGGCCAAAGGGGGAAGATACTTGACGTCAAACAGGCCTCCATTAGCCTGAAAGCCCTTCAGAGCCATGTCCAGTTAATTTGCAGTTGGAGAACAAACAGAGTCTTTCAAATTTATCATTAACAGGATGTACCCTCTGAGCACAATTACTTGTGACAAAAATTAACCCAGTATGGAGAGTTTCAACTAAGAGTGTTGAAGATCTGCAACTAACAACAAAAACAAATTGTTGATCTAGCAACCTAAACAAAAAAATGGTAAGATTTTGCACTAAAAATATCATGAATCTAACACTAAAAAAGCTGGGATGATAATGAGAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000066_01562872_01567304.mRNA True 1757 mRNA 0.40 5 1561842 1567485

Neighbor

gene id symbol gene type direction distance location
CI01000066_01409396_01418995 SLC13A4 coding downstream 142847 1408854 ~ 1418995 (-)
CI01000066_01362241_01380080 PTPRZ1B, PTPRZ1 coding downstream 181762 1361492 ~ 1380080 (-)
CI01000066_01349294_01355967 DCLRE1C coding downstream 205875 1349187 ~ 1356018 (-)
CI01000066_01337577_01339728 CDNF coding downstream 221975 1337317 ~ 1339867 (-)
CI01000066_01300862_01328030 SHANK3B coding downstream 233660 1299738 ~ 1328182 (-)
CI01000066_01584461_01588350 GNS, GNSA coding upstream 16800 1584285 ~ 1588350 (-)
CI01000066_01660506_01700883 ANO2 coding upstream 92450 1659935 ~ 1700883 (-)
CI01000066_01716840_01717090 SMKR1 coding upstream 149192 1716677 ~ 1717090 (-)
CI01000066_01737004_01739028 NA coding upstream 169169 1736654 ~ 1739498 (-)
CI01000066_01740881_01748480 NA coding upstream 172563 1740048 ~ 1749010 (-)
G272149 NA non-coding downstream 7698 1553913 ~ 1554144 (-)
G272140 NA non-coding downstream 26970 1534655 ~ 1534872 (-)
G272059 NA non-coding downstream 125390 1433003 ~ 1436452 (-)
G271904 NA non-coding downstream 213774 1339958 ~ 1348068 (-)
G272165 NA non-coding upstream 28255 1595740 ~ 1598429 (-)
G272193 NA non-coding upstream 136225 1703710 ~ 1703911 (-)
G272194 NA non-coding upstream 136506 1703991 ~ 1704264 (-)
G272053 NA non-coding upstream 232479 1799964 ~ 1801427 (-)
G272066 NA non-coding upstream 241197 1808682 ~ 1812113 (-)
CI01000066_01823227_01826380 NA other upstream 255544 1823029 ~ 1826817 (-)
CI01000066_01843043_01848783 NA other upstream 274194 1842554 ~ 1849466 (-)
G272221 NA other upstream 391617 1959102 ~ 1985228 (-)

Expression


Co-expression Network