CI01000066_01823227_01826380


Basic Information

Item Value
gene id CI01000066_01823227_01826380
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000066
NCBI id null
chromosome length 3719324
location 1823029 ~ 1826817 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000066_01823227_01826380.mRNA
ACTGGCCTATACATAGATCAGAACATGACAACAGATAAGGATGTTTGTAATTCTTTGTAATTTGTCATGGACACACTTATGAAATGCTGAGGACAGATTTAGTAAATACTCCTTCACCACATTTATTTTTTTGCTCCTTGAATATCATATTTTGTTCAATTTGGTTTGGTCTCTTTCTCACAACTATTTATTAACAAATAAGATACATGACTGAATTCATTCTGTCTCTCATCTTTAGGACTCACTGAAGACAGAACCTGTGAATATTAGTCTGATTTTTAGAGGGGAGAAAAAGATCTTCCATCCTGTCTGAGGACAGGCAGTTTGCGGGGCCCGAGCCTCCCCAGGATCTAACCTCAAGCCTGGAGGAGAGCAGCAGTGGTTCGGGCCGCTGGCAAACCGCTGGTCTGGCTGAGTCCTGGGCGTCTGTTAGCGACATGGAGCCAGAGCTTGGAAGTCTAGAAACCAGTGAGATGGTTCTAGTTCAAGAGGACCACAGCGAGAACCACTCCTCCACCTCTGACATCATCCACTTAGAGGCGGAGCTCCACGAGAGGGTGGAGTCAGGTGATGAAGAGGACCTTCAGAGCAGCATGCTGAGCATGATCGGCAGCGATAGGGAGTTGGCAGAGATTGGAGCACATGTCACATCTGCTGCAGAATCAGATCTCAAGCCTCCACAGACGGGGGAACTTCTGATATGTGTGGAGGAGCCAGTTGTGGAGGAAATTGAGACAGAGGTGGATTCTGAGCCAGTTTTCACTCACACTCCTCTTCTGTCCGAGCCGTCAGATTTCACACTGGCTTCTGTTCCCATACCTGAAATCATCTCACAGGTTTTAGATCATCTCCCACCCTCTGAAATCACACTGTCAGAGGAATCTCATACTAATACGCCTAGCGTGTCTCAAGACCACACAACGTCATCTTCAGAAGAGGTTGTTTCAAAGGCAGGCCCGCTTTCCACCTCGCTCTTTGAACTCCCAGTGCTGCTAGTAGGTGGCGCCGCCCTGGTGGCGGTAGTGGGAGTGCTTGCATATAGGCATACCTTGAGTAGAAACAGATGGCAGTATGAATCTCGACATAGACTAAGAGCGACAAGCAAGACTGTGATTGACCGCATTGAAGAGCGCAAATTACACTGTAAAAACAACCTGGAGAGGGCAGAGTTCAGACAGAGAAAAGAACAACTCTCGGACAGTGACAGGCTCGCGCTGGAAGATGAGATGACCATAATGAATGAAAGAATACAGAAATATGAGGTTGTGGTCAGTGTCAGTGTCGTTTTAGCCATGAATACATTGCGCCATCTTCATCTTGGCTTCGGCATCCTGGATTGTCCGAACACTGCTTTATGTTTGCTTTGTAACAGAGTGACATTAGATGCTTGCGCATCAGAGAAAGACACAGATTGGGGATTAAATGTATGTTTATATGATCTTCATTTTTGGGAACTCTTATGTACTTTACGAGATCACAAATTCATTTTATAAAGCATCAGTGTAGACATTTACCCAATAATGACTCGGTGGCGTTTCTCTCCAGATCACTGTTTATTGCATTTCAACAGGACTAACATGCACAAAGGTGGGAAGGGCAGAGGGTGTTATTCCATCCAAAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000066_01823227_01826380.mRNA False 1626 mRNA 0.46 5 1823094 1826817

Neighbor

gene id symbol gene type direction distance location
CI01000066_01788491_01792709 NA coding downstream 30118 1787777 ~ 1792976 (-)
CI01000066_01780056_01782937 APEX1 coding downstream 40002 1779905 ~ 1783092 (-)
CI01000066_01770241_01778472 NA coding downstream 44622 1770088 ~ 1778472 (-)
CI01000066_01759103_01760191 NA coding downstream 62394 1759097 ~ 1760700 (-)
CI01000066_01752509_01757131 SELENOO coding downstream 65963 1751811 ~ 1757131 (-)
CI01000066_01843043_01848783 NA coding upstream 15737 1842554 ~ 1849466 (-)
CI01000066_01850128_01881359 GALNT8B coding upstream 23133 1849950 ~ 1881359 (-)
CI01000066_01889174_01893489 FGF23 coding upstream 62357 1889174 ~ 1893547 (-)
CI01000066_01903226_01906591 FGF6B, FGF6 coding upstream 76391 1903208 ~ 1907648 (-)
CI01000066_01921007_01923459 TIGARB coding upstream 93902 1920719 ~ 1923459 (-)
G272066 NA non-coding downstream 10981 1808682 ~ 1812113 (-)
G272053 NA non-coding downstream 21667 1799964 ~ 1801427 (-)
G272194 NA non-coding downstream 118830 1703991 ~ 1704264 (-)
G272193 NA non-coding downstream 119183 1703710 ~ 1703911 (-)
G272165 NA non-coding downstream 224665 1595740 ~ 1598429 (-)
G272038 NA non-coding upstream 68278 1895095 ~ 1915276 (-)
G272256 NA non-coding upstream 186967 2013784 ~ 2016832 (-)
G272033 NA non-coding upstream 229183 2056000 ~ 2070979 (-)
G272271 NA non-coding upstream 300743 2127560 ~ 2127840 (-)
G272286 NA non-coding upstream 337153 2163970 ~ 2164196 (-)
G272221 NA other upstream 132285 1959102 ~ 1985228 (-)

Expression


Co-expression Network