CI01000066_01950657_01957668 (TMEM209)


Basic Information

Item Value
gene id CI01000066_01950657_01957668
gene name TMEM209
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000066
NCBI id null
chromosome length 3719324
location 1950657 ~ 1958370 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000066_01950657_01957668.mRNA
GTGGAATGTGAAGCAGATCAAACGGCTCTGCCCAGGGGCGCTCTGGATCAGATTGCATTTTGGGTTGAGGCCCTTCATTCATTTGTGACATTTACAGTCGTTTTCAGCCCTAGCTCCTCAGCGTCCCTAAAACTGGGCCCCTCGTCTTTCTGGAAAATCCCTGTGAGCATGTGTCTGGCTCCACTTGTGTGTTCCACGCCGTTGAGGAAACGGGCCAATTACGGAGGCAAGAACTCAGACAGCTTATGGTGTAGTGGAGGATCTAGTGCAGGTATGACCCCATCAAAGGAAGGCATGACCTCCCTCATCGACAAGACCATAAAGCTGAGGAGGGAGGAACAGGCACGGCAGGTTGTCCTGGCATGGGCCGTGCTGAATATGTCTCTGGCTGGGATGATCTATACTGAGATGTCTGGAAAGCTTCTTAGCAGATACTACAACATAACATACTGGCCCATCTGGTATATCGAACTTGCTCTGGCTTCCCTGTTCAGTCTCAATGCGCTTTTTGACTTTTGGAAGTATTTCAAGTATACTATGGCCCCAACGATGATCGCCGTCAGTCCAGAGCAGCATCGACTTCTTGGACTCCGTGGCTCAGGGATTCAAGCCTCTCCACCTCTGAAACAAGAGAAAAAAGAAGCTCCTGTCTCAGTCCAGTCATCGCCCCTGCAGGGACAGAACGTACTCAGTTTTAGTCCTGCACGACCCTCAAGCACCAGCCCCAAGTTTTCCCCCAGCTGTGTCTCAGGGTTCAGTCCACCTCTGGGCAGCCCTTCTTCTGCAGGAGGACCCTTTTCACCCCCCATGACATTTGGCAAGGTGTTGAACTATAGTCCGAGTTCTTCTCCATACCCAAGCAACCTCGGGCCGGCAGATGGCAGCAGCCTCCGTGCTCGTTACCGCACATCCCCATCTGTCTTTAATTCACCCGGAGGCAAGGAGGACTACATCGATGATCTGAAGACTTTGGAGAAGTTTTTGCACACGGAGGAGGAGAAAAGCCACCGCAGTCAATTGGGAAGTCCAGAGTCAACATCTCCAAGACACAGTCCGTCTTTCTGGAACTACAGTCGTTCGGTGGGGGATTACGCACAGAGCCTGAGGAAGTTTCAATACCAGCCGGCCTGCCGTTCACAGGCACCATCTGCCCATAAAGACGACACGGAGCTGGGCTCCAAACAAGCTGCTGAAGAGTGGATAAATGACACCATTCTAGTTCATCTGGTTAGAGAGATGGACTCTGTCAATGGTCAGCTCAGGAGGATAGGCTGCCCTGAGCTACAGATTGGAGAGGCCAGTATCAGCAGTCTCAAACAAGCTGCCGTGGTCAAAGCCTCTGCAATTCCCACCCTCAATTCCATCGTACAGTATCTGGACGTTACGCCAAACCAGGAGTATCTTGTGGAGAGAATCAAGGAACTAGCCCACAGTGGCTGCATGAGCTCTTTCCGCTGGAACGGAGGAGGAGATCTGAAAAACCGGAAATGGGACACAGACCTTCCGACAGACTCTGCTATCCTGATGCATGTGATATGTACATACCTGGACTCACGGCTCCCTCCGCATCCTAAGTATCCTGACGGAAAAACCTTTACGTCCCAGCATTTTATACAGACACCAGATAAACCAGACATGTCCAATGAGAACCTGTTTTGCATCCATCAAAGTAGCACAAACCCTCCTCATTATCAGCTCGTCTACCAGGGACACGTCTACAGCTTGCCCAAGGGCAGAAATAACTTGTTCCATACCATCCTCATGTTCCTCTACATTATCAAAACCAAGGAATCTGGTATGCTGGGGAGAGTGAATCTAGGTCTTTCAGGAGTGAATGTACTCTGGATCTTTGGGGATTGAGATGGTCTTGTTTGCTGCTAAGAGGAAAACACTGCACAAGCCTTGAGATGCGATAAAGACTTTTTTTTACCTTTACATTCTTGTGATGAATGTTTTTGAGATGCATTGTACTCTCACATTACTTGCAACCTTAATGCAAATACAGATTAAGCACAGAAAGTCATTTTAGCTGACGAAAATGTTTTAAACTTCAACACTGAGATGTTTATAGCTTGAAACGGAGTCAAAATAAGACCTTGTTCCACTGGATTTTGTATAAATATTTTTTTGTATTTCATTCATACGAGGAAAAACAATGTGGTTATACATGAATGTAAATTTTTTCAGGCTAGTCAGGGTGGGTGGACATTGCAGGAGTTACGATTTTTAAAAAGCCATTACTGGTAGTTTTTCTTCACCTTTTCATTTTTCTGTACAAATGAACACCTGTTACACTTGTAATGGCATGCAACCGTGAACAAGCATAAGCCACATTTACTTTTTAAAAACAGTTTGGTGTAAGAATGTTTATTTACATTCTCTCAGTGAAGGGCTTTTCTTATTTCTCCTCACTATTACCTTGACAAAAGTGCAGAAGATCCTGATCTTTAGTGCCAAATTACATAATCAACAAAAAGTGTTTGTTGTTTGTATTTTGTATTGTGTCTGAAGTGAAACTTGAAGTGAAATGAGCTTCCACTTTTGTCTTTGGTTTTCAATTTA

Function

symbol description
tmem209 Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human TMEM209 (transmembrane protein 209).

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000066_01950657_01957668.mRNA True 2562 mRNA 0.46 14 1950657 1958370

Neighbor

gene id symbol gene type direction distance location
CI01000066_01834401_01839641 CECR1B coding upstream 110897 1834401 ~ 1839760 (+)
CI01000066_01829752_01832316 ATP6V1E1.L, ATP6V1E1, ATP6V1E1B coding upstream 118341 1829716 ~ 1832316 (+)
CI01000066_01800741_01821480 NA coding upstream 129032 1799752 ~ 1821625 (+)
CI01000066_01793494_01798848 NA coding upstream 151239 1793199 ~ 1799418 (+)
CI01000066_01784212_01786444 GCP, OSGEP, OSGEP.L coding upstream 164151 1783627 ~ 1786506 (+)
CI01000066_01959189_01959479 NA coding downstream 263 1958633 ~ 1960399 (+)
CI01000066_01966833_01995697 AHCYL2.S, MGC79134, AHCYL2 coding downstream 7768 1966138 ~ 1995715 (+)
CI01000066_02011151_02031083 STRIP2 coding downstream 52781 2011151 ~ 2031118 (+)
CI01000066_02055967_02056270 NA coding downstream 97597 2055967 ~ 2056333 (+)
CI01000066_02124655_02126692 YEATS4 coding downstream 166285 2124655 ~ 2126863 (+)
G270978 NA non-coding upstream 14585 1933614 ~ 1936072 (+)
G271015 NA non-coding upstream 30930 1919461 ~ 1919727 (+)
G270972 NA non-coding upstream 102644 1841686 ~ 1848013 (+)
G270923 NA non-coding upstream 159293 1789596 ~ 1791364 (+)
G270931 NA non-coding upstream 223214 1725603 ~ 1727443 (+)
G271023 NA non-coding downstream 45533 2003903 ~ 2005931 (+)
G270996 NA non-coding downstream 104319 2062689 ~ 2066286 (+)
G271050 NA non-coding downstream 149621 2107991 ~ 2108242 (+)
G271051 NA non-coding downstream 149941 2108311 ~ 2108637 (+)
G270982 NA non-coding downstream 161918 2120288 ~ 2123706 (+)
G270973 NA other upstream 102905 1844452 ~ 1847752 (+)
G270546 NA other upstream 1763980 184528 ~ 186677 (+)
CI01000066_00019553_00029834 PAHX, PHYH other upstream 1930384 19447 ~ 30531 (+)
CI01000066_02274624_02277624 NA other downstream 310799 2274557 ~ 2278119 (+)
CI01000066_02296138_02305439 CMAH other downstream 343840 2296071 ~ 2305637 (+)
G271105 NA other downstream 472340 2430710 ~ 2439169 (+)
CI01000066_03211701_03215444 NA other downstream 1254634 3211701 ~ 3215446 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location