CI01000066_01959189_01959479


Basic Information

Item Value
gene id CI01000066_01959189_01959479
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000066
NCBI id null
chromosome length 3719324
location 1958633 ~ 1960399 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000066_01959189_01959479.mRNA
GAATAAAAGCAGGGTAGCCTATGTACAACCATGCTATTCTTTGAATTACCATGTAAATATCATGGTACATGAACATGGTAATTATTTAGTACCATGGTATTACCATATGATGCACCACTATACTGCTACAGTACTGTTTGTGTAAGTGCAAAGTAATGTTTGTCAGAGTTTGAAAGCTTAATTTTGAGAATTTGGTAAAAATCTTATAGTGTAGTATAATAAAAATAAAACAATAATATAGTAAAATATAATATTTTATATAGTAAAAGGGTTTAATAAGTCTTAAAAGTATAATAAAATAGTTATTTTATTATAATATAATGTAGTTAAGAAAAAAAACGTCTGTTACGAAGTCTCCTGGAAAGATTAGTTATTATTACCACGCGCAACATGATGCGTAGTAGACGCTATGGTAACGTGAACTGCATGTCCCATGGTGCTTTGCGCTGAGCGTCATCCCACCGTGCGTATCCGTTCGTGTGTCGCTTCTCTCTGTATTGGGAAAAAAAGCACCGTGCGGTTCGCAGCTATGTCAGTCCAGGCTGTGGCAGCGAAAATGGCCGAGGTCGAATTAAAAGACGTGGCCGGTAAAGACTCTCTCCCCGCCATATCTCCGCTGACACCCAAGGCAGAGGAGAAGAAGAGTGAAAATAACTCTACTTCGTCAGCAGCAGCAGCAGCGGCCGCGGCGGGGGAGCCGAGCCCGGTGACCGCCGCTCCGAACCCCGTGAAGATGCCGCAGGCGTCCGCGATGAAGCGGCCGGACCCGCAGCAGAACGGCGGCGAGGCGTTTGTCAACTGCGACGGCACCGTGGCCGAGGCACCGCGAATGAAAAAGGTAACGTGAACTGTGATGAAGCTCATTTCGTATCATTCATCCGCTGCTGTGTGTCATTGTGCGGCGATTATTCTGGCCTATCAGACCTTTACTAGCACCGTAACAGCTGTAAATTAACGTCCATTTACCTCCCAGCTGTCAGAGGATAATCGGTGACAGATCTACCGAGTGCCTTCACTGGGTTTTTGATCTGATCAGGTTGATTTTGAGCGCGTGAGTGATTGTTTCTAATGATTGAAAGAGACCCGCAGTGCGCGTGTCGTGGCGCTGCATGCGTTTTATCCGGGGCAAAACATTCCGTTCCCAAACATACTACTGTGTATGAAACACTTTTATAATAACTTTAAAAATTATTAATTCGCAAACATTACGTAATGCTTTAGATAAGTAGTAGATGTACAGCTTTCATGTTATTGTTTGATTGTACATTATTTAAGAAATACTTAATGTAATGATGTTTGTTATGAGTTATTACGAAGTGTTACCCACATTTCTTTACTGAAGTGTGCTGTAGTCCCATTTTTGCTATGATCATTTGAGAAACACTGTTAGAGAAACCTACAGATTTACCTTGTGTTTGTAGGTTGAGCAGCTATGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCAGTTTGTTTGTAATAATGATATGCTTTCTTTTTGTTGCATTAACATTTTTCTTACCAGTGCTTCCTCTGTCAATGTTCGCATGTAAATATAAATGTCTAGTTTTGCTTTTCACTTTCAGAAAGGTATTGTGTGAGTGTATGCAAGTCAGTTTTGTGGCATTTGTTGAACTTAAGAATACTGGAGCAAGGCCATGCATTTAAGTAGTTGATGTTTGATTTTTCTGTTATGATTAGGTTGCTTTGTCCAAGTGTCCTCATTGACGATGTGTCATTGGAAGCCCTGCCATTTGACTTTCCGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000066_01959189_01959479.mRNA False 1767 mRNA 0.40 1 1958633 1960399

Neighbor

gene id symbol gene type direction distance location
CI01000066_01950657_01957668 TMEM209 coding upstream 263 1950657 ~ 1958370 (+)
CI01000066_01834401_01839641 CECR1B coding upstream 118873 1834401 ~ 1839760 (+)
CI01000066_01829752_01832316 ATP6V1E1.L, ATP6V1E1, ATP6V1E1B coding upstream 126317 1829716 ~ 1832316 (+)
CI01000066_01800741_01821480 NA coding upstream 137008 1799752 ~ 1821625 (+)
CI01000066_01793494_01798848 NA coding upstream 159215 1793199 ~ 1799418 (+)
CI01000066_01966833_01995697 AHCYL2.S, MGC79134, AHCYL2 coding downstream 5739 1966138 ~ 1995715 (+)
CI01000066_02011151_02031083 STRIP2 coding downstream 50752 2011151 ~ 2031118 (+)
CI01000066_02055967_02056270 NA coding downstream 95568 2055967 ~ 2056333 (+)
CI01000066_02124655_02126692 YEATS4 coding downstream 164256 2124655 ~ 2126863 (+)
CI01000066_02144721_02147772 FRS2A, FRS2 coding downstream 184322 2144721 ~ 2149180 (+)
G271022 NA non-coding upstream 6871 1951554 ~ 1951762 (+)
G270978 NA non-coding upstream 22561 1933614 ~ 1936072 (+)
G271015 NA non-coding upstream 38906 1919461 ~ 1919727 (+)
G270972 NA non-coding upstream 110620 1841686 ~ 1848013 (+)
G270923 NA non-coding upstream 167269 1789596 ~ 1791364 (+)
G271023 NA non-coding downstream 43504 2003903 ~ 2005931 (+)
G270996 NA non-coding downstream 102290 2062689 ~ 2066286 (+)
G271050 NA non-coding downstream 147592 2107991 ~ 2108242 (+)
G271051 NA non-coding downstream 147912 2108311 ~ 2108637 (+)
G270982 NA non-coding downstream 159889 2120288 ~ 2123706 (+)
G270973 NA other upstream 110881 1844452 ~ 1847752 (+)
G270546 NA other upstream 1771956 184528 ~ 186677 (+)
CI01000066_00019553_00029834 PAHX, PHYH other upstream 1938360 19447 ~ 30531 (+)
CI01000066_02274624_02277624 NA other downstream 308770 2274557 ~ 2278119 (+)
CI01000066_02296138_02305439 CMAH other downstream 341811 2296071 ~ 2305637 (+)
G271105 NA other downstream 470311 2430710 ~ 2439169 (+)
CI01000066_03211701_03215444 NA other downstream 1252605 3211701 ~ 3215446 (+)
CI01000066_03354136_03429399 GRM8A, GRM6, GRM8, GRM8B other downstream 1386394 3353662 ~ 3429516 (+)

Expression


Co-expression Network