CI01000066_02287451_02287819


Basic Information

Item Value
gene id CI01000066_02287451_02287819
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000066
NCBI id null
chromosome length 3719324
location 2287344 ~ 2288534 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000066_02287451_02287819.mRNA
ACATAAAAAAAGATTTATCAGCCACCCTCCTTGTGATTTTTATGACTATAATATTGGTACAGGTTCAACTAAGTTCTCGCGTCCGTTAAGCTAGGCCGGAAAGAAAGATGAAGGTAAGTGTCAGAAACTCACAAGAGACTCTACAGAAACCCATACCAATGGAAACAGATGTGGAAAGGGTTAAACAGAGCCACAACTATGTGAAACAAACCACCGTCGAGCCTGGTGAACAGCCAATTCGCGAAACCCTGATTAACAGCCCAGTGAAAAAAGCAGTAAGAATGGAAACACCTGAGACGGTCTCTAACAACACCTTGCTAGCCGCAATCAACAAGATTGGAGAAACACAACAGTCATTTCTGGAGAAATTAATGTCTGTTGAGAATGCTGTGAAAGAAATTAAAGAGCAAGTGACTGGCATAAATAGCAGATTGGATACGACAGGAAAAATTATCAGCGGTATCTGCGGAGAATAAGATGCTGCGGAACAAGGTGAATGAACTTGAATCATACCAAAGACGCTGGAATCTCAAAATATCTGGAATCCCCGAGCAGGACGACGAAAATGTCAAGATGACGGTAATTGATCTTCTCCTGCCATCGCGGATACTTTACAAAACTCACTGGATGTTGCTCACCGTTTAGGTCCCAGAACGAAAAAAGAAATTGCATAGTTTAATTAGTTGTGAAAATCCCATAACTTTAGAAGAGTTAGATTGTACTTTATCCAAAACCCCTTTAAACAAAAGTCCCGGTCCTGATGGCTTGCCATTTGAATTTTATAAGATCTAAGAGATTTGATTTTCGATGTACTTGAAGACTGTTTAAGTTCTGGTGAATTACTAGTCTATGAAACAAGGTCTCATCACTCTTCTACCGAAGCCAAATAAAGATATTCGTTACATTGAAAATTGGAGACCTATTACTCCGCTAAATTCTGATTATAAATTATTAACCTCTCTTTTTGCAAAAAGATTAAAACCCTGTCTGGAAGATATTATTTCAATAACACAATCAGGTTTTATAAAGGGTAGACATATATCTAATAACATAAGTCTTGTATTGGATATGATTGATTATTCTGATCTTATTGAAGAAGGAGCCATCATTCTGTTCTTAGACTTCTATAAGGCGTTTGACTCTATTGAGCATGAATTTATATATACAGCCTTAGATAAATTTGGATTTGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000066_02287451_02287819.mRNA True 1191 mRNA 0.37 1 2287344 2288534

Neighbor

gene id symbol gene type direction distance location
CI01000066_02274624_02277624 NA coding upstream 9225 2274557 ~ 2278119 (+)
CI01000066_02144721_02147772 FRS2A, FRS2 coding upstream 138164 2144721 ~ 2149180 (+)
CI01000066_02124655_02126692 YEATS4 coding upstream 160481 2124655 ~ 2126863 (+)
CI01000066_02055967_02056270 NA coding upstream 231011 2055967 ~ 2056333 (+)
CI01000066_02011151_02031083 STRIP2 coding upstream 256226 2011151 ~ 2031118 (+)
CI01000066_02296138_02305439 CMAH coding downstream 7537 2296071 ~ 2305637 (+)
CI01000066_02320093_02321778 NA coding downstream 31559 2320093 ~ 2322043 (+)
CI01000066_02330898_02340303 NA coding downstream 42364 2330898 ~ 2341338 (+)
CI01000066_02456114_02457813 NA coding downstream 166762 2455296 ~ 2458517 (+)
CI01000066_02503549_02509560 NA coding downstream 213554 2502088 ~ 2510262 (+)
G271111 NA non-coding upstream 510 2285313 ~ 2286834 (+)
G271074 NA non-coding upstream 30086 2256779 ~ 2257258 (+)
G271085 NA non-coding upstream 34494 2252642 ~ 2252850 (+)
G271068 NA non-coding upstream 101715 2185386 ~ 2185629 (+)
G271063 NA non-coding upstream 109128 2178011 ~ 2178216 (+)
G271090 NA non-coding downstream 3472 2292006 ~ 2309532 (+)
G271124 NA non-coding downstream 14300 2302834 ~ 2313213 (+)
G271129 NA non-coding downstream 26469 2315003 ~ 2315625 (+)
G271104 NA non-coding downstream 29403 2317937 ~ 2318240 (+)
G271143 NA non-coding downstream 45643 2334177 ~ 2334388 (+)
G270973 NA other upstream 439592 1844452 ~ 1847752 (+)
G270546 NA other upstream 2100667 184528 ~ 186677 (+)
CI01000066_00019553_00029834 PAHX, PHYH other upstream 2267071 19447 ~ 30531 (+)
G271105 NA other downstream 142176 2430710 ~ 2439169 (+)
CI01000066_03211701_03215444 NA other downstream 924470 3211701 ~ 3215446 (+)
CI01000066_03354136_03429399 GRM8A, GRM6, GRM8, GRM8B other downstream 1058259 3353662 ~ 3429516 (+)

Expression


Co-expression Network