CI01000066_02296138_02305439 (CMAH)


Basic Information

Item Value
gene id CI01000066_02296138_02305439
gene name CMAH
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000066
NCBI id null
chromosome length 3719324
location 2296071 ~ 2305637 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000066_02296138_02305439.mRNA
TTATATAAGACCTTATTATAAAAGATCTGCCAATGCCAGTCTCTAGATTTGAGGCCTCCGGAGCACAATGACATCTCAGGTCTCAAAGACGGTCCTGCGACTGCAAGCTGAAGAAGTCCAGACACTGAAAGATGGAATTAATTTCAAGAAAAACCCAGAGGATGGCAAATGTTACATCATTTACAAAGCCAAAGACAAACTACGAGCGTGTAGAAACCAGTGCAAACACCAGGGTGGACTCTTCATTGAAGACATAGAGGACTTGGGCGGCAGGACAGTGCGCTGCACTAAACACTACTGGAAACTTAACGTGGCCACCATGGAGTACGTCAACCCTCCAGACAGCTTCATGCAAGATGAACTCGAAAGCTGGAAGGCGGATTTTATCAAGAATGAGAGGAAGAAACTGCTGAACTATAAGACTCAGCTGGTGAAATCCCTGCAGCCCAAGATCTACTGCCCCTTTGCTGGATACTTCACTGAAGCTCATCCCTCTGACAGGTACATAAAGGAGACGAACATCAAGAACAGCCCAGTAGACCTGAATGAATCCATAAGGAAGAGCTGTCCAAACACCTTAACCTGGACACCTTTACCCGGTTCTGTCCTGGATTTGGCCCTCGCACTAAAAGACCCATCTAACAGGAGTGCCATCACTAAACCGTACAACGGTACAAAAATCTATAAGGACAGTTGGGACTTTGACTGGTATGTGGATGAGCTAAATGCTTCCATTTCAGCTGAAATCTTTAAATACAAAAGCTGGATCCAGCACTATTATAACTGGGCGGGATTTAAAGGCTACAATCTGGTCATTCGGGTCATTGAAACGGATGATGATTTCAAGCCCCTGCGTGAAGGTTACGACTATCTGGTGGACTTTATGGACCTTTCTTTCCCAGAAATGCGCCCGGAGAGAGAGCATGCATATGAGGAGATCAAGAACAGAGTGGGTGTGATGAGGCACGTGGTTTTGAACGGGCTGCTATGGGACGACCTGTACATCGGCTTCAATAACAGAATGAGTCGAGATCCTGATGTTTACCACCACAAGTAAAATACAATCATCACAATATGAAAAGGAAAAATACATAAGAGTGTGTTAGTGATGTATCAATTGGAAATGTTTGGGATTTTATTCATTTACCATGGTATTTACATGCTACCCCCAAGTACTTCAAAGAATGCACCTGACGGAACCCTTGAAGATTCCATATAGAACCTTTTCTTCTAATGTATGAAGGTTTTAAGGATA

Function

symbol description
cmah Predicted to enable 2 iron, 2 sulfur cluster binding activity; CMP-N-acetylneuraminate monooxygenase activity; and metal ion binding activity. Predicted to be involved in N-acetylneuraminate metabolic process. Predicted to be located in cytoplasm. Is expressed in several structures, including gill; heart; integument; liver; and pleuroperitoneal region. Orthologous to human CMAHP (cytidine monophospho-N-acetylneuraminic acid hydroxylase, pseudogene).

GO:

id name namespace
GO:0005737 cytoplasm cellular_component

KEGG:

id description
K08080 CMAH; CMP-N-acetylneuraminate monooxygenase

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000066_02296138_02305439.mRNA False 1255 mRNA 0.44 7 2296071 2305637

Neighbor

gene id symbol gene type direction distance location
CI01000066_02287451_02287819 NA coding upstream 7537 2287344 ~ 2288534 (+)
CI01000066_02274624_02277624 NA coding upstream 17952 2274557 ~ 2278119 (+)
CI01000066_02144721_02147772 FRS2A, FRS2 coding upstream 146891 2144721 ~ 2149180 (+)
CI01000066_02124655_02126692 YEATS4 coding upstream 169208 2124655 ~ 2126863 (+)
CI01000066_02055967_02056270 NA coding upstream 239738 2055967 ~ 2056333 (+)
CI01000066_02320093_02321778 NA coding downstream 14456 2320093 ~ 2322043 (+)
CI01000066_02330898_02340303 NA coding downstream 25261 2330898 ~ 2341338 (+)
CI01000066_02456114_02457813 NA coding downstream 149659 2455296 ~ 2458517 (+)
CI01000066_02503549_02509560 NA coding downstream 196451 2502088 ~ 2510262 (+)
CI01000066_02511030_02521229 ZDHHC17 coding downstream 205317 2510954 ~ 2521490 (+)
G271111 NA non-coding upstream 9237 2285313 ~ 2286834 (+)
G271074 NA non-coding upstream 38813 2256779 ~ 2257258 (+)
G271085 NA non-coding upstream 43221 2252642 ~ 2252850 (+)
G271068 NA non-coding upstream 110442 2185386 ~ 2185629 (+)
G271063 NA non-coding upstream 117855 2178011 ~ 2178216 (+)
G271129 NA non-coding downstream 9366 2315003 ~ 2315625 (+)
G271104 NA non-coding downstream 12300 2317937 ~ 2318240 (+)
G271143 NA non-coding downstream 28540 2334177 ~ 2334388 (+)
G271086 NA non-coding downstream 28959 2334596 ~ 2393844 (+)
G271206 NA non-coding downstream 235073 2540710 ~ 2540943 (+)
G270973 NA other upstream 448319 1844452 ~ 1847752 (+)
G270546 NA other upstream 2109394 184528 ~ 186677 (+)
CI01000066_00019553_00029834 PAHX, PHYH other upstream 2275798 19447 ~ 30531 (+)
G271105 NA other downstream 125073 2430710 ~ 2439169 (+)
CI01000066_03211701_03215444 NA other downstream 907367 3211701 ~ 3215446 (+)
CI01000066_03354136_03429399 GRM8A, GRM6, GRM8, GRM8B other downstream 1041156 3353662 ~ 3429516 (+)

Expression


Co-expression Network