XLOC_010437 (pimr209)


Basic Information

Item Value
gene id XLOC_010437
gene name pimr209
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 7688368 ~ 7692568 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00020505
ATCCGATCTTGTTTTGGAGGCAGTATCTGAATTAGGATCATCCAGTCACGAAGTGAAGCCTGATCTGGAGCCATCATCTGCATCGGGTCCATCCAGTTGTAAGCTGACGCCTGGTCCAATTTATTCTTGGCCGGGTAAAGGATCATTTTACTCCTTTTATGATGTGGGAAAGATTCTGGGAAGTGGAGCCTATGGCACTGTGAAGTTGGCGAGACGCAGATTTGATGGCCAGAAGGTTGCTGTCAAATTTCTTAAAAAGAACACATGGGACAAGTTTATCAATGTGCCTGGATGTGCCAAACCTTTGGTTGCGGAAGTGGCAGTGAATCTGCTGCTGCGCAAATCCCAAAGCCCCCACATCGTACAAATGATCGATTGGTATGAGGAGCCAGAGAAGTACATCCTCATCATGGAATATCCAGATCCATGTGAGACCTTGGAAATGTTCATCAGTGGCAAAGGAGGATCACTAGGAGAAACTGTGGCTCGTGGCTTATTTCGCCAAGTGGTGCTCGCAGCCAAACACTGCGCTGACCAGAGCATCTTCCACAAAGACATCAAATCAGACAACATCCTGATCAACACGGACACGCTGCAGCTCAAATTGATTGACTTTGGCTGTAGTGAGCTTATTATGAACCCTACCTCTATAAATCATGAATGGGCCATGAAAGAAGCCATTTGCAGCTTGCGAAATCTGCTTATAGAAATGGTGAGCGGAGGCCAGCATTTTATGTCATTTCTGACCAGAAAAGATGATCAGTTGATTCCAGGATATTCCAAAGAGTTTCAAGATCTGATAACTCAGTGCCATAAAAAAGATGACGGCGGAAGAGCAACGTTGGAGCAGATCTTGCAGCACCAATGGCTTCAGCAGGTTTG

Function

symbol description
pimr209 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in negative regulation of apoptotic process; protein autophosphorylation; and regulation of mitotic cell cycle. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm.

GO:

id name namespace
GO:0043066 negative regulation of apoptotic process biological_process
GO:0006468 protein phosphorylation biological_process
GO:0007346 regulation of mitotic cell cycle biological_process
GO:0016310 phosphorylation biological_process
GO:0046777 protein autophosphorylation biological_process
GO:0005737 cytoplasm cellular_component
GO:0016740 transferase activity molecular_function
GO:0005524 ATP binding molecular_function
GO:0000166 nucleotide binding molecular_function
GO:0004672 protein kinase activity molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function
GO:0016301 kinase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-110411-216 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in negative regulation of apoptotic process; protein autophosphorylation; and regulation of mitotic cell cycle. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm.

Ensembl:

ensembl_id ENSDARG00000058532

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00020505 True 882 mRNA 0.46 6 7688368 7692568

Neighbor

gene id symbol gene type direction distance location
XLOC_010436 NA coding downstream 67253 7508101 ~ 7621115 (-)
XLOC_010435 prdm1a coding downstream 244980 7430998 ~ 7443388 (-)
XLOC_010434 med18 coding downstream 309040 7376471 ~ 7379328 (-)
XLOC_010433 foxo6a coding downstream 325562 7315144 ~ 7362806 (-)
XLOC_010432 si:ch73-341k19.1 coding downstream 448860 7202082 ~ 7239508 (-)
XLOC_010438 BX511173.1 coding upstream 1313 7693881 ~ 7696216 (-)
XLOC_010439 trim71 coding upstream 50090 7742658 ~ 7793457 (-)
XLOC_010440 tcaim coding upstream 110162 7802730 ~ 7828848 (-)
XLOC_010441 NA coding upstream 141651 7834219 ~ 7881277 (-)
XLOC_010442 CU856516.1 coding upstream 275452 7968020 ~ 7984901 (-)
XLOC_010626 CR392024.2 misc upstream 13202544 20895112 ~ 20895175 (-)
XLOC_010430 AL845419.1 non-coding downstream 858733 6828552 ~ 6829635 (-)
XLOC_010428 NA non-coding downstream 1036649 6648030 ~ 6651719 (-)
XLOC_010427 NA non-coding downstream 1053072 6605385 ~ 6635296 (-)
XLOC_010426 NA non-coding downstream 1097198 6588022 ~ 6591170 (-)
XLOC_010444 NA non-coding upstream 448144 8140712 ~ 8142312 (-)
XLOC_010447 CR478208.1 non-coding upstream 595203 8287771 ~ 8288447 (-)

Expression


Co-expression Network