CI01000066_03211701_03215444


Basic Information

Item Value
gene id CI01000066_03211701_03215444
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000066
NCBI id null
chromosome length 3719324
location 3211701 ~ 3215446 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000066_03211701_03215444.mRNA
CCCAGCTGCACTAGATACGCCTACAGGCATATTTGCACACCTGCCGCGTATTCAGACCAACCCAATGCTGAATTACCCCTGCGAGCCTCTGAAATCAGCTCTTTTGAGACCTCGCAAACACTGTTGTGGCTCTTGGCTGAGTTTCACTGGCAGATGAGACACGATGTTAAGGCCAAGGCCGGTAGTTGGGGAATAGTTGAACACAGGGTGTCTGGCAGCGTCGGTGCTGTCCTGCTCAGCTCTGCACCCGCTCCTCCTCCTCCTGAACCTGCGCCCGGCTGGCAGAGATGCAGCGGAGACGCACGTCTGTCCAGCGATGAAGGCGAGGCCGACCTCCCTGAAGAGACCGAGAAGCCGCTGTACCATTATTCTCCACACCACCCACAACCCATGAGCTGTTGTGCGTTTAGCAGTCGGCTGATGGGAAGAGGTCACTACGTGTTCGACAGACGGTGGGACCGGGTGAGGCTGGCGCTGCACTGCATGGTGGAAAAACACGTCAACTCTCTCATGTGGAGGCGAGTTACACGTTTGTCTGTCTGCTTGCATAATTATGGCCATATTTGGAAAGTCCCCCTAGCGGTGGAGAGCGTGACGAGCACTTCCCCCTGCCCGTCTGAAGTCTCTCCCCTCGGCTCAGCGTTCCCGCCCAACCACACGCTCACGGCTCCTCTGGAGGGCGTCTCGATGCTCTCATACTCCACCTCTTTCTCTCAGAACGGCGCTGGTGTTTTCTGCATCAGGGACCCCGAGCCCGGACCCCGACTGCAGCGGAATAAACCGGCCAGGCCACCGAAAGCCTCAGGGGAAGGACCAGGACCCAGAAAGCGGAAAGCGCCTCCCACTTCTGAATCAGGGGCTTGCCGTAAAAGCGGGAACAGCTACCATCTGCCACCGGGCGCTGCGCTCATCAGTAACGGGACGGCGGCCCTTAGCGTGCGAGCCAAGCCCCGGCCAGGGGGACAGGGGCCGAGGGACCAGGACAGGTACGGCGGTGTGGAGCTGTCCCTCCCGCAGGCGCTCACCGGGGATCACGGGGGCGTCTCGTCCCACAGCCCGCTGCCCTGCGCTTCCTCTGACGGGAGGAAAAGGAAGAGCTCTGGATCGAGCGCTGGCAGCGACAAACCCAGTAAAACCTCTAAATCCACAGCACTGGACGGGATATTCAGGAAGAGCAGCACCGGTCTGCTGTCGTCGGTCGCTGAAACGGCCCACAGCGCCCTCCCCAGACAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000066_03211701_03215444.mRNA False 1233 mRNA 0.61 6 3211701 3215444
Loading

Neighbor

gene id symbol gene type direction distance location
CI01000066_03195286_03201328 SYPL1 coding upstream 10029 3195286 ~ 3201672 (+)
CI01000066_03174704_03185343 NAMPT, NAMPT.S, NAMPTA coding upstream 26358 3174704 ~ 3185343 (+)
CI01000066_03148145_03156040 NA coding upstream 55233 3148145 ~ 3156468 (+)
CI01000066_03011532_03035612 NA coding upstream 174435 3011415 ~ 3037266 (+)
CI01000066_02977587_02982602 NA coding upstream 228831 2975647 ~ 2982870 (+)
CI01000066_03231699_03235207 NA coding downstream 16255 3231699 ~ 3237053 (+)
CI01000066_03241522_03246506 GRM8 coding downstream 26078 3241522 ~ 3246802 (+)
CI01000066_03303268_03342257 GRM7 coding downstream 87509 3298872 ~ 3342605 (+)
CI01000066_03354136_03429399 GRM8A, GRM6, GRM8, GRM8B coding downstream 138656 3353662 ~ 3429516 (+)
CI01000066_03460752_03462377 NA coding downstream 245255 3460460 ~ 3462937 (+)
G271485 NA non-coding upstream 7529 3203396 ~ 3204172 (+)
G271461 NA non-coding upstream 90800 3120666 ~ 3120901 (+)
G271458 NA non-coding upstream 97703 3113755 ~ 3113998 (+)
G271396 NA non-coding upstream 165730 3045334 ~ 3045971 (+)
G271395 NA non-coding upstream 166715 2999812 ~ 3044986 (+)
G271435 NA non-coding downstream 41208 3256652 ~ 3264434 (+)
G271479 NA non-coding downstream 365964 3581408 ~ 3586319 (+)
G271478 NA non-coding downstream 399517 3614961 ~ 3617633 (+)
G271105 NA other upstream 772532 2430710 ~ 2439169 (+)
CI01000066_02296138_02305439 CMAH other upstream 904681 2296071 ~ 2305637 (+)
CI01000066_02274624_02277624 NA other upstream 932141 2274557 ~ 2278119 (+)
G270973 NA other upstream 1363949 1844452 ~ 1847752 (+)

Expression

CI01000066_03211701_03215444 Expression in PRJCA010000

Bar chart with 27 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 0.2.
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CI01000066_03211701_03215444 Expression in each Bioproject

Bar chart with 29 bars.
CI01000066_03211701_03215444 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 3.
End of interactive chart.

Co-expression Network