CI01000066_03439936_03446824



Basic Information


Item Value
gene id CI01000066_03439936_03446824
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000066
NCBI id null
chromosome length 3719324
location 3439679 ~ 3448858 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000066_03439936_03446824.mRNA
AGTCATCTGCTCACAGGTAAGACCGAACTGACTTTACTACTTCTGTTCACTACCTTCAGACCCCAGACAAAGCTGAATATTTTCAACCTTTAAATAATATGTTGTTTTCTCAAGTCAGCATACAGACGAAGGAAATACTGTACATATTTGAAGGTGTTTCGAAAAAGAATACAAGCTGATTTTCATTTCTTCAGATCACATGAACGAGATTCAGACCATTTGATAAAATTTCAGATTCTGGTTTACAATATGCAAAGAACTGCTCTGGTGTTTCTATCTGCCCTGCTCATATTCTGGGGTGAGTATTAAACCCTGCTTATATCATATGTTGCTGAGCAAATCTGCAAAAGAAAACAAAATTCAGCTGCTTTGCTTGTGAAATGTAATAGTATTTTTTTCATGTTAATGACATTCTCTGTGTAATTAAATTGTGCATGGATCGCGGAACCGGGGGGGCCGCCCGGGCCTGGGGCCGGGTAACTTTTGAGGTCTGGTACAAATATGATATAGAAAAATACATAGGGTACAGGTCCATATGCATGCACGCTGCCGCTGATCCATCTCTGAAACAGCTTCACAGTGTTTTCAGCTGACTGCTATTGCAAACATACGAAATATTGGGCTAAAAGTTTATAGTCAGCATATAAACATAAATATCGTGGCATTCGCAATCAAAATGAGTAAATTACCTTTGAATCCAATAGCCACGGCTCGTCTGTAGGGGCAAGTTGGGCAAATCCCCACCTAAATATTCATTCAAACATGTATATAAGCTGAAACAATAGCCTAATAAATTGTAAATGTGTTCAACATTATGCAACATATTTTTCGGATTTTCTTGACTATTTTAAGACGTAAAGTGAGCAGGATATTACAATTTAACGTATGTCTCCGGCAGGCAAGTATTATGATAAGCGGCAGTCGGTCCTTAGCTCTACAGCGCCCCACAATATTACAATGTAAATCTGTGGTGAAAAATGGAACTGCAGCGCGCTGTAATTGTGAGCCATTGGGGCAGATTTCAGACTGTCCCGCTTATTTTCACAGTTGTTTGGTCTTTTCGATTTTTGAAAAACTTTACATATTCTAAATAAACTTTAAAGGCTGTTTGGAAATGAGCAAAATTGGGTTTAGAGTCATTCTTTTTTTTTTTTTTTTTGATTAATACACAATTTTCCAAATAACAAAAACAAATCGAAAAAATAAGCCTTTATATTTGTCTTTTTGGAAAAGTCGTATTCATTTGAATGAAATATGTTTCCCTTATTTGAGTGGGAACATTTCTGGGTAGTTCTCGATATTGTTAAACAAATAAAACTGACAATTTTTAATATTTTAAAACAACGTGTGCCGTGTGTGTCAATCAACATTACAGCGCCACCCTCAGGCTGAATAACGCAACGTCTGCCAAAAGTGTTCTCTGTGTGTTCAGCGATTAGAATATAAAGCATGCAAAAATTGTTTAATTGCCCTACCTATTTACAGTCAGGAGCTGCTACTGGAAACTAATGTTACTCTTGATATAAAGATTGTATATTGATGAAATATAACTAGCTATATGATGAAATTCGTTCAAAAATTCTGAATGAAACAAGTCTTCATTCATTAATTTCAAAGGCTTTTACATAATTCATTTAAATCAATAAATATTTTAATAGACTCATTTATAACGTTTATAGACATTTATAAATCGATTCATTTATAACATTAAAAGAACATTTTGTCAGAACCCATTATTTTGTTTGGTTGTCTGTTTTGTTTTCAGAATCCTGGGAGAACCGTGATCTCTGTCTCTAAAAAAAAAAATACAGATTATCCAGTCAAAAATTAAGCTTAAAAGAAAATATAATATATGTGGCATCCAATTTATAGTAGGTCACCATTAGCACTAATATTAAAAAGTATTACAGACTAGGATGTAAAATGTACAATACAGACAATAAAGTTTTTATGTAGCCTACATTAACAATGATTTGTGGCAATTAAAATGCATTATAATGGAGGATTATGAAAAGTTTTTTTCTTATTTAAAACATGGCTCTTCTCATCCAATCTGCGAAGTTCTGCAAACCACGCCCCTTTATCACCTCTGACCCCCCCCCCCTTCTTTCGGTACGTTCCGCGATCCATGAAATTGTGCATAGCACAAGTAAAAATGATTTTATTATCAAGGTCCTGCACAGGTCTATAATGTCCATATTAAAGATCATATTTCACATAAACACATGTGTAGGGACCTGGGAGGCGGCTGTGGATTATTGCAACAGTCATGACAATACAACTGGACTACTGACCATTCATTCTCAGAGTGATCAGATAGAAATAGAGCGAGAGCTAAAAAGAAAGAATATCTCCGGGCCAATGTGGGTGGGGCTTAGACAGAGTCGACTTTTCGGATTCTGGATTTGGATCAACAGGGTTACTGTGGGACCCTGGACCAACTGGAAAAGAGGAAGTCAACCAGAACATCTGATATCCCACCACTGCGGTGCCATAGAGGAGCTTGTAGCAACAGATTCAATAGCCTCCGCAGGGCTGCTAAAAGTGAAAAACATAAGACACATGTTGGTAGAACTCACATTAAAATGGGTTGTGCATCAGCAACATGTTTCCCCCTTTACGGCTGGTTACATTCAGTTCCTCTGCCATCATCATCTATACACTCGACCCTTACAGCTCCGACCACATCTGCCCTTGTTACCAAGCAGCAATGTCATCCACATCTCGTTTTTCAATCATCCCCACCTTTCTCCCTCACTCAACACCGAGATGAATGAAATATCACACAATGGAACATGGCAAAACGGGTCGAAGAGTTCGGCTCAGAGATACCTATTCAGCGGGGATCATCAATACACAAGTCAAGAACACGGGCACGTCGGCTCTAACAGCCCTGTGCACTCGGAGACCAAAAGCAGCACCTTCATTAAAACTTCAGCAAAGTGCGTGACTGACGACAAAACGCTCAGCAGATGTGTCATGACTCGCAGTGAGCTCGGAGTGAAAAGGCTCTCGGCTCTTTGTAAATGGAGCCGAACCGCATTGCTGTCCCTCGAGTCTGCCATTAGAGGAAAAATCCCGTTAGGGCTGAAAAGTTTTATGTGCGGAAAATTGCCGTGGGTACTCTGAGGCTCACATTTGACCAGGTCTGGAGTCATTACGATAACGGGCCACTGCTTTTAAAGCAAAACTAGCTTTTAAAAAGATTAAAGTAGCTGATCGTAATCCTGAAAAGAGGTGGAGATTTGAGCAATCCTGATGCTGACATGCACAGCACGCTTATTTTAGCATCATTGAGATACTAGGGTAGTATTTTAAATTACTTTTTATTTTTATATTTTCCATTTTCATTTGTTTCCATTCCATTCATAATTTACATTAATAAA

Function


NR:

description
LOC100007376 protein, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000066_03439936_03446824.mRNA False 3386 mRNA 0.38 3 3439679 3448858

Neighbor


gene id symbol gene type direction distance location
CI01000066_03203296_03203476 NA coding downstream 236203 3203123 ~ 3203476 (-)
CI01000066_03158972_03165320 PIK3CG coding downstream 274359 3158316 ~ 3165320 (-)
CI01000066_03044933_03045997 NA coding downstream 393682 3044336 ~ 3045997 (-)
CI01000066_02891474_02931062 PLEKHA5 coding downstream 508617 2890829 ~ 2931062 (-)
CI01000066_02874325_02887004 AEBP2 coding downstream 552346 2874061 ~ 2887333 (-)
CI01000066_03454386_03455995 NA coding upstream 5472 3454330 ~ 3456166 (-)
CI01000066_03649007_03654018 LMOD2 coding upstream 200074 3648932 ~ 3654018 (-)
CI01000066_03655461_03659325 ASB15B coding upstream 205974 3654832 ~ 3659717 (-)
CI01000066_03711890_03717941 PMPCB.L, PMPCB coding upstream 262591 3711449 ~ 3717941 (-)
G272472 NA non-coding downstream 125390 3243268 ~ 3314289 (-)
G272462 NA non-coding downstream 223605 3214796 ~ 3216074 (-)
G272431 NA non-coding downstream 318773 3120464 ~ 3120906 (-)
G272428 NA non-coding downstream 325682 3113755 ~ 3113997 (-)
G272417 NA non-coding downstream 354076 3085215 ~ 3085603 (-)
G272559 NA non-coding upstream 19035 3467893 ~ 3567133 (-)
G272561 NA non-coding upstream 132922 3581780 ~ 3582119 (-)
G272613 NA non-coding upstream 138698 3587556 ~ 3587801 (-)
G272614 NA non-coding upstream 139470 3588328 ~ 3588529 (-)
G272615 NA non-coding upstream 140137 3588995 ~ 3589368 (-)
G272221 NA other downstream 1454451 1959102 ~ 1985228 (-)
CI01000066_01843043_01848783 NA other downstream 1590820 1842554 ~ 1849466 (-)
CI01000066_01823227_01826380 NA other downstream 1614976 1823029 ~ 1826817 (-)
G272618 NA non-coding upstream 104088 3592149 ~ 3592438 (-)

Expression



Co-expression Network