XLOC_010440 (tcaim)


Basic Information

Item Value
gene id XLOC_010440
gene name tcaim
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 7802730 ~ 7828848 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00020509
TTGGGCCTGAATGGAGTGCTTTAGTTCAGATGGAGTTTCAACCACAGCGAACATGTCGGATTGCGTAACCCCCAGCTGAAGTAACTAACGTGATGTATGTGACCACCTTCCTGCGTTATATAAGGCTTGGTGGTAGATGTGTTTCTGCTCGTGTCCTTCAGAGGAGGAATCTCTCAGGAGCGGATGCCATTAATGCTCTGCGGCCCTTTTACTTTGCAGTGCACCCGGATTTCTTTGGCCAGCATCCGAGAGAGAgagAGGTGAATGAAAACTCCCTCAAAAGGCTCAATGGTTATCTGGAAAACATTCAAAAGCCCGGCGAGAGATTTCCAAAACCTACAAACTTCACTTTTTATGTCAGGGACACAAAAGAAAAATCGGACCCCAATGGTAGTTTGCTAGTTTCAGGTTTCCGGTCTGTGAGTTTCACTCTACAGTCTAAGGATGTTCTGAGCACAGTGCTGGATGTTCTGAGATCATGTAGTCTTTCGGTTGAGCATATGCAGGATGTGCTCAAGCACGAGACCACAAAGAGCTCGACACAACAGCCTGGAACAGCTTTCTATCGGCCCATCAAATGGGACAAGACGTATTATACTTTCACTGGATTCAGGGACCCAGAACAGGAGCTGGAGCAGGCCAGAAGAGTGGAGCCCACACTCAGtttatgGCTGAGAAAAAATGAGCCAGAAGCCACAAAGAAACAGAATGCCAGTCTTCCACATCGTGAAGAGCTGAAAAGACTAAAAAGAGAGCTGATTCAGAAACTCGGTTTATTAAATATAAGATGGCAGCGCAAATGGGGAGTTGCACACAAATGCAGTCAGCTGCAGAGTCTGAGTCGCCTCTCCACACAAAGCCCCGAGGCTCTGCTCAACCTGAGAGGGCACATAATCATTTTTACTGACCAATCAGGGATGAATGCCTCTGGGCATGTGATGTTGGGAACAACAGATGTCCACCATCAATGGACAAAGCTCTTTGAAAGACTACCAAGCTACAGAAGCCTGTTTGAGCAGTCGGCCGCACTGAAGGAGCGCATCAGTCACCTGTTGGGAGGGATTCATGTAGTCCACATGGAGCGGTTGGGTCCAGGTCTGACTCTGGAGGAACACTATAACACCCTCAGCAGCTTTCTCAGAAGAGTCTCACCTCAGCGTCTCTCCCTGCACCCCCGCAGCCTGCAGGGCCTCTTGATGACCTTGGAAAATGACCGCTCCACCCCCTGCCTGCATGAGATGGGCCACTTCATCATCCCCACCATGTGTGACACCCTCCAGCTGCAGAACTTCCTCCAGAGTCAGGCTCACGAGGCCCGCAGACGCATGCTGAGCAAAGACAAGTTGGAGGCGGAGGAAGAAGACATCATTTCCAGCTGTCTGGAGGATTTGTGTCTGCGCAGCCTGTCTAAAGAGCCCAGCGTGTCCAGCAATCAGATGATCCCCTGCTGCCGGCGTCTGATGGAGGAACGATCTCCTCAAATGCAAGgtcttcatctgtgtgtgtcGCATTTCTATTCAGTCATGCAGGACGGGGATCTGTGTATTCCCTGGAACTGGAAAGGCTGAAACATATCAATGAGCTTTATATCGGATTACTTTACCTCCCGGGCTCATGTagtactattaaaaataatagataCTGGCCTAATGTTTAGGCATAAATATAAATGCACTTTTGGATGTAGAGTTCTACCACAAAGTGTTGATGGTTATCAGGCAGTAGGGCACTATGATGTAATGTAACTTAGCACTGAATAGGTTCTAAAGATTTGCACAGCTAATCACACACATGAACATTAGCATAATAATcccttttgtgtttttttcactGCAGATTAAAAATTaagtcactatttactcaccctcaagtgctaccaaataataataataataataattccttaaatttatatagcgcttttctgggcactcaaagcgctttacacatggggggaatctcctcatccaccaccaaacCTTTGTCTTTTTAAACGAATATAtaaactattgactttcatagtagggaaaacaaatactatttctaagtcaatggttaccggtttttaacatttttcaaaatagcttcttttgaGTTTGACAAAAAAAGACACCCAAGCTAAAggaggagtaaatgatgacagaaatttctgtttttttgtgtgaactttaGCTTAAAGCATTTAGTGTGTTCCAAAAACAGCTTTTGGAAATGCTGATAATTGCGGAAGTTCATTTTCAGCATAAAGCAAAATAacaatatctcacaattctgactgtGAGACCTAAATGAGCACTTGCGGATATTATTTaagtcactatttactcactctcaaatgCTTCCGAACCTTTATGTCTTTTCAGAATATATTTTGAACGCATATTCAGAAATAtgttacaaatgatcaactattgACTTtgatagtagaaaaaacaaatcatatgaaagtcaatggtttccgggattcaacatttttcaaaatagcttcttttgtgtttgacagaagaaagacacccaaactggtttggaacaagtaaagaaggagtaaatgatgacagaaatgtcagttttttttgtgtgaactatcgcCTAAAGTATTCCAAAAACAGCTTTTGGAAATGCTGATAATTGCGGAAGTTCATTTTCAGGATAAAGcagaataacaatagaaaatgtGATCGATCTCGCAATTCTGACCTTTTTACTGTTCCGATGTAAATGAGCAGTCCTGAGAAGAAAATCTCAATTGTGAGAATAAAAAGTCGCAATTACACTTGTTTATGCTCgacaaagaaactttttttttctgtcaatcgTCATTCGGATTTTCTATCttgcaaatattattttagtcactATCTACTCACCCgcaagtgcttccaaaccttttTGTCTTTTCAGAATATATTTTGAACACATAACATAATCAGAAATATGTTACAAATGAacaactattgactttcatagtagaaaaaacaaatactatgaaagtcaatggttaccggttttcaacatttttcaaaataacttcttttgtgttcgacagaagaaagacacccaaactggtttggaacaagtaaaggaggagtaaatgatgacacttGACACATACTTCTGTGAAATATCCCTTAAAGTATACTAAAAACAGCTTTTGGAAAAGCTGATAATTGCGTAAGCTTATTTTCAGAATAGAGCAgaacaacaattaaaaaatgtgacCGATCTCACAGTTCTGACCTTTTGTCTGACGGATGTAAATGAGCAGTGCTGAGAAGAAAATCTAAATTGTGAGAATTAAAAAGTCATAATTAGTCATGCTGCTGCTTggttctaagatcacatttgcacaaatactgggccatatttattttcaaaccctGCTTTTGAGAAaactacaattttaaaatgatttccaaccagccaaagtggctagtgggagcggctatctaacccgccacagctgaaatctattTGTATTTGGCGGGTTGgagggtgttaatgtcaagccctgattatttGTATTATTGCTTGCCAAAAGCGTTATTAGAATTCTCACAATCTTTTTTTTCTGGAGGGGTAATCGCTCAGATGCGAGTTTACATTTGAATAGTGACATACAAtctcaaattgtaaaaaaaaggcAGATAATTGTCAGATAAAAAGTACTTTTATGAAATCACTTTTGTCAGAAAACTAAGCTTCCATAGATCATAAATTCATCTCTTTTAATCTTAAAGAAACAGGGAAGGTTTCTTTGGATgcaattttggattttttttatgcacattgtTGGATTTGGGGTCTTCAGTGCAGCGTGCCACTGCAGTCATGGTCCAAATGAGTGATTTCTTAAGTTTTTGTCATTTCAAACCTGAATGTTTCTTAATCACAGAAGATAAACGCATTTCTTACGGTAACACTGACTGCCAAAATCTAAAATGCACAGTCGAAATACTTGTTTTCTGCGCAACTACAGAAATGAGAGTCAAAAAGATTCTCTGAAAATGTAGTGTTCTCTTCTGTGTGTACATTATCAGTCCTGAATGCTGCAATGGTGTCTGTCCTGAGACGTACAGTATATCTGTGTTGTTTGCTGCTGTGTTAAAAGTTTATAACTATACGTCTGTATGCCCAATAAATAGTGAACTATGTAAAAACTAGGTTTTAACCATGGTTCCAGTTTGAATGATCACCATTGTCATTTTCTACATGTTTGCTTTGGCATGTTTAATGTTGGACAATTCTGTGAATTATCCACTGTAATCAACaccaataaatattataattcagaTGTGTAATATA
>TCONS_00020510
CTGAAGTAACTAACGTGATGTATGTGACCACCTTCCTGCGTTATATAAGGCTTGGTGGTAGATGTGTTTCTGCTCGTGTCCTTCAGAGGAGGAATCTCTCAGGAGCGGATGCCATTAATGCTCTGCGGCCCTTTTACTTTGCAGTGCACCCGGATTTCTTTGGCCAGCATCCGAGAGAGAgagAGGTGAATGAAAACTCCCTCAAAAGGCTCAATGGTTATCTGGAAAACATTCAAAAGCCCGGCGAGAGATTTCCAAAACCTACAAACTTCACTTTTTATGTCAGGGACACAAAAGAAAAATCGGACCCCAATGGTAGTTTGCTAGTTTCAGGTTTCCGGTCTGTGAGTTTCACTCTACAGTCTAAGGATGTTCTGAGCACAGTGCTGGATGTTCTGAGATCATGTAGTCTTTCGGTTGAGCATATGCAGGATGTGCTCAAGCACGAGACCACAAAGAGCTCGACACAACAGCCTGGAACAGCTTTCTATCGGCCCATCAAATGGGACAAGACGTATTATACTTTCACTGGATTCAGGGACCCAGAACAGGAGCTGGAGCAGGCCAGAAGAGTGGAGCCCACACTCAGtttatgGCTGAGAAAAAATGAGCCAGAAGCCACAAAGAAACAGAATGCCAGTCTTCCACATCGTGAAGAGCTGAAAAGACTAAAAAGAGAGCTGATTCAGAAACTCGGTTTATTAAATATAAGATGGCAGCGCAAATGGGGAGTTGCACACAAATGCAGTCAGCTGCAGAGTCTGAGTCGCCTCTCCACACAAAGCCCCGAGGCTCTGCTCAACCTGAGAGGGCACATAATCATTTTTACTGACCAATCAGGGATGAATGCCTCTGGGCATGTGATGTTGGGAACAACAGATGTCCACCATCAATGGACAAAGCTCTTTGAAAGACTACCAAGCTACAGAAGCCTGTTTGAGCAGTCGGCCGCACTGAAGGAGCGCATCAGTCACCTGTTGGGAGGGATTCATGTAGTCCACATGGAGCGGTTGGGTCCAGGTCTGACTCTGGAGGAACACTATAACACCCTCAGCAGCTTTCTCAGAAGAGTCTCACCTCAGCGTCTCTCCCTGCACCCCCGCAGCCTGCAGGGCCTCTTGATGACCTTGGAAAATGACCGCTCCACCCCCTGCCTGCATGAGATGGGCCACTTCATCATCCCCACCATGTGTGACACCCTCCAGCTGCAGAACTTCCTCCAGAGTCAGGCTCACGAGGCCCGCAGACGCATGCTGAGCAAAGACAAGTTGGAGGCGGAGGAAGAAGACATCATTTCCAGCTGTCTGGAGGATTTGTGTCTGCGCAGCCTGTCTAAAGAGCCCAGCGTGTCCAGCAATCAGATGATCCCCTGCTGCCGGCGTCTGATGGAGGAACGATCTCCTCAAATGCAAGgtcttcatctgtgtgtgtcGCATTTCTATTCAGTCATGCAGGACGGGGATCTGTGTATTCCCTGGAACTGGAAAGGCTGA
>TCONS_00020511
CAGATAAGTAttgtttgcaaactctaaatagcgaaatccgAAGACCAAATTAaatcccagagtggatgaaaacatccccaacaacacacaagggttaatataCAAACAATCTGTCATGCTTTTCTTTTCTCATGTGTCTGGATTTCTCTCAGCTGAAGTAACTAACGTGATGTATGTGACCACCTTCCTGCGTTATATAAGGTAAGTAATAACCActtgttttttaaaatagtaaaaactcTTTAAATAGTTCTTTTTGAGTCCTAGCAGCATAGGAAATGTCTTGTTTTTCTAATGATATTTCACTCTTCCAGGCTTGGTGGTAGATGTGTTTCTGCTCGTGTCCTTCAGAGGAGGAATCTCTCAGGAGCGGATGCCATTAATGCTCTGCGGCCCTTTTACTTTGCAGTGCACCCGGATTTCTTTGGCCAGCATCCGAGAGAGAgagAGGTGAATGAAAACTCCCTCAAAAGGCTCAATGGTTATCTGGAAAACATTCAAAAGCCCGGCGAGAGATTTCCAAAACCTACAAACTTCACTTTTTATGTCAGGGACACAAAAGAAAAATCGGACCCCAATGGTAGTTTGCTAGTTTCAGGTTTCCGGTCTGTGAGTTTCACTCTACAGTCTAAGGATGTTCTGAGCACAGTGCTGGATGTTCTGAGATCATGTAGTCTTTCGGTTGAGCATATGCAGGATGTGCTCAAGCACGAGACCACAAAGAGCTCGACACAACAGCCTGGAACAGCTTTCTATCGGCCCATCAAATGGGACAAGACGTATTATACTTTCACTGGATTCAGGGACCCAGAACAGGAGCTGGAGCAGGCCAGAAGAGTGGAGCCCACACTCAGtttatgGCTGAGAAAAAATGAGCCAGAAGCCACAAAGAAACAGAATGCCAGTCTTCCACATCGTGAAGAGCTGAAAAGACTAAAAAGAGAGCTGATTCAGAAACTCGGTTTATTAAATATAAGATGGCAGCGCAAATGGGGAGTTGCACACAAATGCAGTCAGCTGCAGAGTCTGAGTCGCCTCTCCACACAAAGCCCCGAGGCTCTGCTCAACCTGAGAGGGCACATAATCATTTTTACTGACCAATCAGGGATGAATGCCTCTGGGCATGTGATGTTGGGAACAACAGATGTCCACCATCAATGGACAAAGCTCTTTGAAAGACTACCAAGCTACAGAAGCCTGTTTGAGCAGTCGGCCGCACTGAAGGAGCGCATCAGTCACCTGTTGGGAGGGATTCATGTAGTCCACATGGAGCGGTTGGGTCCAGGTCTGACTCTGGAGGAACACTATAACACCCTCAGCAGCTTTCTCAGAAGAGTCTCACCTCAGCGTCTCTCCCTGCACCCCCGCAGCCTGCAGGGCCTCTTGATGACCTTGGAAAATGACCGCTCCACCCCCTGCCTGCATGAGATGGGCCACTTCATCATCCCCACCATGTGTGACACCCTCCAGCTGCAGAACTTCCTCCAGAGTCAGGCTCACGAGGCCCGCAGACGCATGCTGAGCAAAGACAAGTTGGAGGCGGAGGAAGAAGACATCATTTCCAGCTGTCTGGAGGATTTGTGTCTGCGCAGCCTGTCTAAAGAGCCCAGCGTGTCCAGCAATCAGATGATCCCCTGCTGCCGGCGTCTGATGGAGGAACGATCTCCTCAAATGCAAGgtcttcatctgtgtgtgtcGCATTTCTATTCAGTCATGCAGGACGGGGATCTGTGTATTCCCTGGAACTGGAAAGGCTGA
>TCONS_00020512
ATGGAGTGCTTTAGTTCAGATGGAGTTTCAACCACAGCGAACATGTCGGATTGCGTAACCCCCAGGCTTGGTGGTAGATGTGTTTCTGCTCGTGTCCTTCAGAGGAGGAATCTCTCAGGAGCGGATGCCATTAATGCTCTGCGGCCCTTTTACTTTGCAGTGCACCCGGATTTCTTTGGCCAGCATCCGAGAGAGAgagAGGTGAATGAAAACTCCCTCAAAAGGCTCAATGGTTATCTGGAAAACATTCAAAAGCCCGGCGAGAGATTTCCAAAACCTACAAACTTCACTTTTTATGTCAGGGACACAAAAGAAAAATCGGACCCCAATGGTAGTTTGCTAGTTTCAGGTTTCCGGTCTGTGAGTTTCACTCTACAGTCTAAGGATGTTCTGAGCACAGTGCTGGATGTTCTGAGATCATGTAGTCTTTCGGTTGAGCATATGCAGGATGTGCTCAAGCACGAGACCACAAAGAGCTCGACACAACAGCCTGGAACAGCTTTCTATCGGCCCATCAAATGGGACAAGACGTATTATACTTTCACTGGATTCAGGGACCCAGAACAGGAGCTGGAGCAGGCCAGAAGAGTGGAGCCCACACTCAGtttatgGCTGAGAAAAAATGAGCCAGAAGCCACAAAGAAACAGAATGCCAGTCTTCCACATCGTGAAGAGCTGAAAAGACTAAAAAGAGAGCTGATTCAGAAACTCGGTTTATTAAATATAAGATGGCAGCGCAAATGGGGAGTTGCACACAAATGCAGTCAGCTGCAGAGTCTGAGTCGCCTCTCCACACAAAGCCCCGAGGCTCTGCTCAACCTGAGAGGGCACATAATCATTTTTACTGACCAATCAGGGATGAATGCCTCTGGGCATGTGATGTTGGGAACAACAGATGTCCACCATCAATGGACAAAGCTCTTTGAAAGACTACCAAGCTACAGAAGCCTGTTTGAGCAGTCGGCCGCACTGAAGGAGCGCATCAGTCACCTGTTGGGAGGGATTCATGTAGTCCACATGGAGCGGTTGGGTCCAGGTCTGACTCTGGAGGAACACTATAACACCCTCAGCAGCTTTCTCAGAAGAGTCTCACCTCAGCGTCTCTCCCTGCACCCCCGCAGCCTGCAGGGCCTCTTGATGACCTTGGAAAATGACCGCTCCACCCCCTGCCTGCATGAGATGGGCCACTTCATCATCCCCACCATGTGTGACACCCTCCAGCTGCAGAACTTCCTCCAGAGTCAGGCTCACGAGGCCCGCAGACGCATGCTGAGCAAAGACAAGTTGGAGGCGGAGGAAGAAGACATCATTTCCAGCTGTCTGGAGGATTTGTGTCTGCGCAGCCTGTCTAAAGAGCCCAGCGTGTCCAGCAATCAGATGATCCCCTGCTGCCGGCGTCTGATGGAGGAACGATCTCCTCAAATGCAAGgtcttcatctgtgtgtgtcGCATTTCTATTCAGTCATGCAGGACGGGGATCTGTGTATTCCCTGGAACTGGAAAGGCTGA

Function

symbol description
tcaim Orthologous to human TCAIM (T cell activation inhibitor, mitochondrial).

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-160113-67 Orthologous to human TCAIM (T cell activation inhibitor, mitochondrial).

Ensembl:

ensembl_id ENSDARG00000079881

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00020509 False 4302 mRNA 0.40 11 7802730 7828848
TCONS_00020510 False 1493 mRNA 0.50 10 7805464 7827365
TCONS_00020511 False 1758 mRNA 0.48 9 7805464 7827517
TCONS_00020512 True 1509 mRNA 0.50 10 7805464 7828838

Neighbor

gene id symbol gene type direction distance location
XLOC_010439 trim71 coding downstream 9273 7742658 ~ 7793457 (-)
XLOC_010438 BX511173.1 coding downstream 106514 7693881 ~ 7696216 (-)
XLOC_010437 pimr209 coding downstream 110162 7688368 ~ 7692568 (-)
XLOC_010436 NA coding downstream 181615 7508101 ~ 7621115 (-)
XLOC_010435 prdm1a coding downstream 359342 7430998 ~ 7443388 (-)
XLOC_010441 NA coding upstream 5371 7834219 ~ 7881277 (-)
XLOC_010442 CU856516.1 coding upstream 139172 7968020 ~ 7984901 (-)
XLOC_010443 snrka coding upstream 219048 8047896 ~ 8132742 (-)
XLOC_010444 NA coding upstream 311864 8140712 ~ 8142312 (-)
XLOC_010445 gask1a coding upstream 359340 8188188 ~ 8251985 (-)
XLOC_010626 CR392024.2 misc upstream 13066264 20895112 ~ 20895175 (-)
XLOC_010430 AL845419.1 non-coding downstream 973095 6828552 ~ 6829635 (-)
XLOC_010428 NA non-coding downstream 1151011 6648030 ~ 6651719 (-)
XLOC_010427 NA non-coding downstream 1167434 6605385 ~ 6635296 (-)
XLOC_010447 CR478208.1 non-coding upstream 458923 8287771 ~ 8288447 (-)
XLOC_010450 CU062417.1 non-coding upstream 650032 8478880 ~ 8479009 (-)

Expression


Co-expression Network