CI01000066_03655461_03659325 (ASB15B)


Basic Information

Item Value
gene id CI01000066_03655461_03659325
gene name ASB15B
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000066
NCBI id null
chromosome length 3719324
location 3654832 ~ 3659717 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000066_03655461_03659325.mRNA
ATTTAATGTGTATTTATGTCAGGCATTTGCCTTCTGTCTAAGCTTCAAGAAGGCAAACTAAACACTATGTGTGTTTGTGGGCCGCTCCACGTGAGGGAACTCAAACCCTCTTGCCTAATGTCAGAGCGACCTGCATTCTCAAAGTGTCTAGAGAAAGCGGGTCAGGACTAAATATATCCTTCAGGACATGCAAAAACAAACTCAGTCTGTGTTTTGTAGCGCTACGTGGAGCATGACATTTCTTCTGATAGCTTAACAAATACTTTTAGGACAGAGTTACACCAAAAACAAAGTAGAATTGGCGCACGTTTTATAATCCATCTGCATGACTGAAGTTCTCTTTGGGATTTGAGTTTTGTTTGTGTGTACATCCTTGTGACCTCTGAAACACAATGGACTACATGGAACAAATGGATGAAGATCAGCTCATTGAGATCGCTATTCAAATGAGCCTCCAAGATACCTGCAGTTTCTCCGTTTTAAATGAACCGTTAAGCACTTTAGAAACAGCCAGTGATGAAAACCTGAAGATTTTATCTGCTATAAATCAAAGTGATGTGTTTGCACTAAGGAAACTGCACAAGTACAGCGATGCCTATAAAGAAAGAGACAGCAGAGGTTGGCTTCCGATGCACAGAGCGTCTGTCCAGCCAGGTGCCCGTGTGCTGGATCTCGTCCTCCTGGCATCCTATGAGTTGAGCATGGAGGAGATGACGACCGATGGAGACACTGCTCTGACTCTGGCTTCTCAAGCAGGACATGTGGAGAATGTGAAGGTTCTTCTCCAACACGGAGCATCTCCACACAACATGAACAGCAAGAACGAGACTCCACTTCTCCTGGCCGTGAGGTCAAACTCTTATGATATGGTTCATGCACTTATAATGGGAGGCGCCATCGTGGAGCAGGTGTGTTTGAAGAAGTGGACGGCCACCCATGAGGCCGCTAAGGTGGGATGCGTGGACATCCTGATGCTGTTGCTGAAACACGGGGGGAAGGTGATGGGACGTGATGGGCACGGGGTCACACCGCTGGGCATCGCTGCAGAGTATGGCCATCCGGATATACTGGCAATCCTTATAGAACATGGGGGCGACGCCACTGCACAAGCTACAAATGGAGACAGTGTGTTATATGATGCTGCAGGCTCTGGGAACCTGGACTGTATTAATCTACTCCTACAACATGGTGCAAGTCCTAATATAGCCAGTTTTTGCTCTCAACTGCCAATTCACCGTGCAGCCTACGAAGGGCACTACCTGGCTTTGAGGACCTTCATTCCCATCACCACTAAGAGGGCCATCCGTCTGTCCGGTATGAGTCCGGTTCATTCTGCGGCAGACGGAGGCCACGCTGACTGTCTCGAGCTGCTCATCGAAAAAGGCTTTGACGTCAACCCAATCTTAGACTGCCATATTTCTGAAAACTACGGTGACATGAGGAAGACCCCGCTGTACTTCGCCATCTGCAATGGAGACGTCACCTGCACCGAGATACTTCTGAAAGCAGGTGCAAACCCAGACCTAGACCCTCTGCGCTGCCTCCTGGTGGCGGTCAGAGCTGGGAAACACGAGTTGGTGCGGCTGCTTCTCGCCTATGGGGCGAACGTCAACTGCGTGTTCTCTGTCATCAGTGACACTGTATTTCCCACGGCGCTGCAATACTGCCTCAAAGATGAAATGATGCTGCGTCTGCTCCTTAACAATGGATACCATGCAGAAAGCTGCTTCAAGTGTTATCATCACAAGCCTGTAACGACATACACATGGACGGAGGTTCATAGCCAGTCACACCAAATCAAGAGCAATCCGAACAAAGTGACCTTTTGCGAGTTCATTAGCGTGTCATGGATGGCACACTTGGCTGGGAGGGTGGTGCAAACACTCCTGGATTACGTGAGTCACATGCACATCTGCTCCAAACTGCAACACATTCTGGAGAGACAGGAGGAGTGGCCCAACATCTGCGACATCCTCAGGAACCCACAACCTTTGAAACACCAGGCCAGGTTGGTTATCAGGAGACATATGACACTGAGAAGACTGAATGACCCAGAGTTCATGAGCACCGCTCCTTTCCCCCCGGCACTGAAGAACTTCCTGCTCTACAAAGAACATGATGTCTATGGTCGAATGGATGAACACTAGATATATATGCATCTATATGTATTTTATTCCAATTTGTTTTATTTATTGGTTTGTTTCTAAACAATATCATTGTGATTATATCATTTTTCATACGTTATGCACCTAAATATGCACCTTTGTTTTTGATTTCGAAGTAAAATTTGACCTGGACATGATTTACTCTAAATAGTTGCATGCTAAAAATGGGATTATTTTTTAAACCATAACAATTTGGCATACATTTTAATATTCACCAACATTCATCCTGGCCCTAATCCAACAACACTGAGGATTTGCTGAATCTGGTGTTGCTAGAGACCCTTGTTATCAGAGCAACAACATTCCTGCGCTGTCAACGCCAGTCGGCGGCTTCGGAGATGCAGCGGACACTGTGTTCCTGTCATAAACACAGATCTAGCCTCTCCTGGTTGTTTGGATCCTATGGGACAACAAATAGCTTATCTGAGTGTTCACATTCAGACCAGATCTGATCATTACAAACACACAGGCCTGACCTGACAGCTTATGGCCTTTGAAATCCATTCATATCTACACCATATTAACCTTTAGCCTCTCTTCAGATTCACTACTTTTTAGGCAAGCGGAGGATTTGATAGTATGACGTATGCTTCAATGAATGCAATAATAAA

Function

symbol description
asb15b Predicted to be involved in protein ubiquitination. Predicted to act upstream of or within intracellular signal transduction. Orthologous to human ASB15 (ankyrin repeat and SOCS box containing 15).

NR:

description
unnamed protein product

GO:

id name namespace
GO:0005737 cytoplasm cellular_component

KEGG:

id description
K10337 ASB15; ankyrin repeat and SOCS box protein 15

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000066_03655461_03659325.mRNA True 2776 mRNA 0.46 9 3654832 3659717

Neighbor

gene id symbol gene type direction distance location
CI01000066_03649007_03654018 LMOD2 coding downstream 814 3648932 ~ 3654018 (-)
CI01000066_03454386_03455995 NA coding downstream 198666 3454330 ~ 3456166 (-)
CI01000066_03439936_03446824 NA coding downstream 205974 3439679 ~ 3448858 (-)
CI01000066_03203296_03203476 NA coding downstream 451356 3203123 ~ 3203476 (-)
CI01000066_03158972_03165320 PIK3CG coding downstream 489512 3158316 ~ 3165320 (-)
CI01000066_03711890_03717941 PMPCB.L, PMPCB coding upstream 51732 3711449 ~ 3717941 (-)
G272630 NA non-coding downstream 35238 3619368 ~ 3619594 (-)
G272622 NA non-coding downstream 37212 3615867 ~ 3617620 (-)
G272626 NA non-coding downstream 51598 3602979 ~ 3603234 (-)
G272624 NA non-coding downstream 55710 3598798 ~ 3599122 (-)
G272618 NA non-coding downstream 62394 3592149 ~ 3592438 (-)
G272604 NA non-coding upstream 2837 3662554 ~ 3666238 (-)
G272637 NA non-coding upstream 15946 3675663 ~ 3678834 (-)
G272640 NA non-coding upstream 33062 3692779 ~ 3701605 (-)
G272647 NA non-coding upstream 43773 3703490 ~ 3704368 (-)
G272646 NA non-coding upstream 45979 3705696 ~ 3706773 (-)
G272221 NA other downstream 1669604 1959102 ~ 1985228 (-)
CI01000066_01843043_01848783 NA other downstream 1805973 1842554 ~ 1849466 (-)
CI01000066_01823227_01826380 NA other downstream 1830129 1823029 ~ 1826817 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_028440 asb15b coding NC_007115.7 CM002888.2 4120570 ~ 4129187 (-)