G270545


Basic Information

Item Value
gene id G270545
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000066
NCBI id null
chromosome length 3719324
location 184196 ~ 184427 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU307007
AGTTTTATATGAAGCTTGAACATCCTATACTTAGTGCAAAACAGACAGTTAAACATTGCAGATGATTCCCTACTTGTTTTTGTTTGGTTTTCGTTTTAAGGAATTCTTTTAACATTTTGTACAATGTTAAATATCATACTGATCTGCCATAAAACCGAAGGCCGTTGCCAGTACGGTGAGAACTTATATGGGCAGTGCGAGTTAAAAAGTAGAGGATTGATGAGAAATCAGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU307007 True 232 lncRNA 0.35 1 184196 184427

Neighbor

gene id symbol gene type direction distance location
CI01000066_00151325_00157474 OPTN coding upstream 26052 151236 ~ 158144 (+)
CI01000066_00109609_00131845 CAMK1D.L, CAMK1D, CAMK1DA coding upstream 52017 109609 ~ 132179 (+)
CI01000066_00063935_00066860 CDC123 coding upstream 117003 63935 ~ 67193 (+)
CI01000066_00043800_00047188 UCMAA, UCMA coding upstream 136441 43492 ~ 47755 (+)
CI01000066_00019553_00029834 PAHX, PHYH coding upstream 153665 19447 ~ 30531 (+)
CI01000066_00273310_00276428 NA coding downstream 88730 273157 ~ 276498 (+)
CI01000066_00300974_00304363 NINJ2 coding downstream 115809 300236 ~ 304408 (+)
CI01000066_00344664_00393673 NA coding downstream 160237 344664 ~ 394325 (+)
CI01000066_00400218_00405333 NA coding downstream 215353 399780 ~ 405603 (+)
CI01000066_00419486_00436877 NA coding downstream 234491 418918 ~ 437551 (+)
G270525 NA non-coding upstream 4019 63222 ~ 180177 (+)
G270531 NA non-coding upstream 126499 48452 ~ 57697 (+)
G270546 NA non-coding downstream 1782 184528 ~ 186677 (+)
G270547 NA non-coding downstream 10259 194686 ~ 196431 (+)
G270567 NA non-coding downstream 40707 225134 ~ 275259 (+)
G270586 NA non-coding downstream 67646 252073 ~ 252391 (+)
G270587 NA non-coding downstream 69227 253654 ~ 257325 (+)
G270973 NA other downstream 1660025 1844452 ~ 1847752 (+)
CI01000066_02274624_02277624 NA other downstream 2084742 2274557 ~ 2278119 (+)
CI01000066_02296138_02305439 CMAH other downstream 2117783 2296071 ~ 2305637 (+)

Expression


Co-expression Network