Gene
RNA
| Item | Value |
|---|---|
| gene id | G270567 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000066 |
| NCBI id | null |
| chromosome length | 3719324 |
| location | 225134 ~ 275259 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| 1-acyl-sn-glycerol-3-phosphate acyltransferase gamma-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU307046 | True | 596 | lncRNA | 0.40 | 2 | 225134 | 275259 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000066_00151325_00157474 | OPTN | coding | upstream | 66990 | 151236 ~ 158144 (+) |
| CI01000066_00109609_00131845 | CAMK1D.L, CAMK1D, CAMK1DA | coding | upstream | 92955 | 109609 ~ 132179 (+) |
| CI01000066_00063935_00066860 | CDC123 | coding | upstream | 157941 | 63935 ~ 67193 (+) |
| CI01000066_00043800_00047188 | UCMAA, UCMA | coding | upstream | 177379 | 43492 ~ 47755 (+) |
| CI01000066_00019553_00029834 | PAHX, PHYH | coding | upstream | 194603 | 19447 ~ 30531 (+) |
| CI01000066_00300974_00304363 | NINJ2 | coding | downstream | 24977 | 300236 ~ 304408 (+) |
| CI01000066_00344664_00393673 | NA | coding | downstream | 69405 | 344664 ~ 394325 (+) |
| CI01000066_00400218_00405333 | NA | coding | downstream | 124521 | 399780 ~ 405603 (+) |
| CI01000066_00419486_00436877 | NA | coding | downstream | 143659 | 418918 ~ 437551 (+) |
| CI01000066_00451123_00488660 | NA | coding | downstream | 173804 | 449063 ~ 488712 (+) |
| G270547 | NA | non-coding | upstream | 28703 | 194686 ~ 196431 (+) |
| G270546 | NA | non-coding | upstream | 38457 | 184528 ~ 186677 (+) |
| G270545 | NA | non-coding | upstream | 40707 | 184196 ~ 184427 (+) |
| G270525 | NA | non-coding | upstream | 44957 | 63222 ~ 180177 (+) |
| G270531 | NA | non-coding | upstream | 167437 | 48452 ~ 57697 (+) |
| CI01000066_00273310_00276428 | NA | non-coding | downstream | 682 | 273157 ~ 276498 (+) |
| G270602 | NA | non-coding | downstream | 1647 | 276906 ~ 277129 (+) |
| G270603 | NA | non-coding | downstream | 2020 | 277279 ~ 277662 (+) |
| G270633 | NA | non-coding | downstream | 259018 | 534277 ~ 534507 (+) |
| G270625 | NA | non-coding | downstream | 293918 | 569177 ~ 577204 (+) |
| G270973 | NA | other | downstream | 1569193 | 1844452 ~ 1847752 (+) |
| CI01000066_02274624_02277624 | NA | other | downstream | 1993910 | 2274557 ~ 2278119 (+) |
| CI01000066_02296138_02305439 | CMAH | other | downstream | 2026951 | 2296071 ~ 2305637 (+) |
| G271105 | NA | other | downstream | 2155451 | 2430710 ~ 2439169 (+) |
