G270602


Basic Information

Item Value
gene id G270602
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000066
NCBI id null
chromosome length 3719324
location 276906 ~ 277129 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU307083
AAGCTTTTAAAGTGTTTTTTCATTAGTGTACACTATCACCAAATCAGCATTAGAATGATTTCTGAAGGATCATGTGATACTGAAGACTGGAGTAATGATGCTGAAAATTCAGCTTTGCCATCAAGGGAATAAATAACATTTTAAAATATATTAAAGGGGACTTATAATAACCCTTTCACAAGATGTAGTTTAAGTCTCTGGTGTCCCCACCATGTGTCTGTGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU307083 True 224 lncRNA 0.34 1 276906 277129

Neighbor

gene id symbol gene type direction distance location
CI01000066_00273310_00276428 NA coding upstream 408 273157 ~ 276498 (+)
CI01000066_00151325_00157474 OPTN coding upstream 118762 151236 ~ 158144 (+)
CI01000066_00109609_00131845 CAMK1D.L, CAMK1D, CAMK1DA coding upstream 144727 109609 ~ 132179 (+)
CI01000066_00063935_00066860 CDC123 coding upstream 209713 63935 ~ 67193 (+)
CI01000066_00043800_00047188 UCMAA, UCMA coding upstream 229151 43492 ~ 47755 (+)
CI01000066_00300974_00304363 NINJ2 coding downstream 23107 300236 ~ 304408 (+)
CI01000066_00344664_00393673 NA coding downstream 67535 344664 ~ 394325 (+)
CI01000066_00400218_00405333 NA coding downstream 122651 399780 ~ 405603 (+)
CI01000066_00419486_00436877 NA coding downstream 141789 418918 ~ 437551 (+)
CI01000066_00451123_00488660 NA coding downstream 171934 449063 ~ 488712 (+)
G270567 NA non-coding upstream 1647 225134 ~ 275259 (+)
G270594 NA non-coding upstream 9265 265876 ~ 267641 (+)
G270587 NA non-coding upstream 19581 253654 ~ 257325 (+)
G270586 NA non-coding upstream 24515 252073 ~ 252391 (+)
G270603 NA non-coding downstream 150 277279 ~ 277662 (+)
G270633 NA non-coding downstream 257148 534277 ~ 534507 (+)
G270625 NA non-coding downstream 292048 569177 ~ 577204 (+)
G270648 NA non-coding downstream 360352 637481 ~ 643950 (+)
G270650 NA non-coding downstream 394064 671193 ~ 671425 (+)
G270546 NA other upstream 90229 184528 ~ 186677 (+)
CI01000066_00019553_00029834 PAHX, PHYH other upstream 256633 19447 ~ 30531 (+)
G270973 NA other downstream 1567323 1844452 ~ 1847752 (+)
CI01000066_02274624_02277624 NA other downstream 1992040 2274557 ~ 2278119 (+)
CI01000066_02296138_02305439 CMAH other downstream 2025081 2296071 ~ 2305637 (+)
G271105 NA other downstream 2153581 2430710 ~ 2439169 (+)

Expression


Co-expression Network