XLOC_010444


Basic Information

Item Value
gene id XLOC_010444
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 8140712 ~ 8142312 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00021785
TTTTTTTAACTGGAAATACAAAATCTAAATACAACAAAATGACATTATACTTTACAAATTATGTATCATATATGGAAGGCGAGGCTCAACACAATATTAAGTCAAGAAAAAGAGTACACAAAAGACAAAAAGATAAGTACAAAGAGTGTAAAGTTACAAAAATAGTCCAAActaaaattttacaaaacaacaaaacagatACTGGCTATAGCAAGTTTTataatagaaataaattaaacattttttaaggcATTTCATTTCAGCCAGGCAATCCGAAaaagtttttaattcttttaaaaaagacaatGAGTAGTAgagaatttttgaaaaatcggcatttataaataaaatatttggctaATACAATGCTATTTTTTATCAAACCGTGAAAAACAGAGCAATCTTTAGTAGTTCCATATAGTAAATCTTGTAATGTGAAAGTCAAACCTTCAGCAACCACCTACTTTATTATCATCCAGTCTTgcactattttccaaaacgaatgaGCAAAACCGCAAGTAAAAATATGTGTTCTGTGTCTTCAATTAAGTGTTTGCATAAATAGCATgggggctaataattcattaatatttctgacttcaactgtatttttatagggtatatataattaaatatttaaaattgtatttatttagctttGGGGGGAATTGAAAATTTAAGATTGTAAATGCCGTTCTAAAATGTTTAACAGTATTTTTATCCAATGTATGATATAATTTATGTATTAATACTTG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00021785 True 755 lncRNA 0.27 3 8140712 8142312

Neighbor

gene id symbol gene type direction distance location
XLOC_010443 snrka coding downstream 7970 8047896 ~ 8132742 (-)
XLOC_010442 CU856516.1 coding downstream 155811 7968020 ~ 7984901 (-)
XLOC_010441 NA coding downstream 259435 7834219 ~ 7881277 (-)
XLOC_010440 tcaim coding downstream 311864 7802730 ~ 7828848 (-)
XLOC_010439 trim71 coding downstream 347255 7742658 ~ 7793457 (-)
XLOC_010445 gask1a coding upstream 45876 8188188 ~ 8251985 (-)
XLOC_010446 entpd3 coding upstream 115891 8258203 ~ 8280885 (-)
XLOC_010447 CR478208.1 coding upstream 145459 8287771 ~ 8288447 (-)
XLOC_010448 ddc coding upstream 156230 8298542 ~ 8342749 (-)
XLOC_010449 grb10b coding upstream 221773 8364085 ~ 8520474 (-)
XLOC_010626 CR392024.2 misc upstream 12752800 20895112 ~ 20895175 (-)
XLOC_010438 BX511173.1 non-coding downstream 444496 7693881 ~ 7696216 (-)
XLOC_010436 NA non-coding downstream 519597 7508101 ~ 7621115 (-)
XLOC_010430 AL845419.1 non-coding downstream 1311077 6828552 ~ 6829635 (-)
XLOC_010450 CU062417.1 non-coding upstream 336568 8478880 ~ 8479009 (-)
XLOC_010452 NA non-coding upstream 526669 8668981 ~ 8679462 (-)
XLOC_010455 CR394537.1 non-coding upstream 1159767 9302079 ~ 9302194 (-)
XLOC_010458 FO704756.1 non-coding upstream 1422191 9564503 ~ 9566371 (-)

Expression


Co-expression Network