G271849


Basic Information

Item Value
gene id G271849
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000066
NCBI id null
chromosome length 3719324
location 655000 ~ 656203 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU308504
CTGAATGCAAGCAAACAGAGAAGTGTCCAAATGTTAGTCAAGGTTTCTTGGACCAAAACAATAGTAATTTAGTTTCACATTACCATTTTCCAGGTCTCTCTGACCCTTGTTGTTAAACAACATACACTTCAAAACACAGAATAGGAATGAATGCAAGATTGTGTATTTTCGGTATGAAAGTCAGACACATGGGGTCTCTGCGGGAGGCTAGCAGGGCTCTGTGTCATCTCTGTGGTCTCGTGTGAGATTTGCGAGAGGATGGCAGGTCATACTGTACTCCAGCCCATGTCTGGAAGTCAGATTAGAGCCAGATCATGTGAGCTACAGAGAAGGGCTAGGCGAAGCTCAAACGGTCTTCAAAAACACAAAAAGAGATCAGACATTTGATGTTTAATACAGCAATGACTTCTCAACATGACTAAAACAGAAACCAGTCGCCTATCAAAATGTCTTGTGGATCATAGTTGTAGCTGCTTAGCACAAAAACTCATGGAAGAAACAAGATTAATAGCTTGGTGCTTTAAGACATCAGGCCTGGTGAGGACACGGTGTGAAGGTTCATGTAAAGGCTATTGCCGTGTGAAGACAGTCAAAATATTTATACCAAGCATGCTGGCACCTCATCACGGAGAATATAAAAATAATGTAGCACATATACACAGCACTCAAAGGTGACTTTGAAAGACCTTGTGGGATATTTTGAGACAGAGGCACGTGTTCGGTGACAAATAACAGCAGCAAAAGTTTGGAACAGGAGCACGGGTTTGGTAAGGATATGATCATGTGCATTTCAATTCCTGGAATGCTGGGAACATCCTGTTGCAGGATTCTGGAATGGCATATCCTCGGCGGGAGGGCCACGAGTCTCGTTTAGCACAGTTCAGAGGCTACAGTTCAGCAACAACACCTACGTATCTCTGAACCAGAACATTTTATTACATGGGTAAGTTATTTAATTTCTCTCTTGTTCTTCCAAAGTACACGTACATTCAATAAGCTAAGAGGTGGTCAGATGCCAAACATATGGAAATCTGCACTATTTGGCCCAAAATTGTGGGCTAATATATTAATTTGACTAATAATAATGATTATTATAATTATTATTATCAACATTACTGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU308504 True 1120 lncRNA 0.41 2 655000 656203

Neighbor

gene id symbol gene type direction distance location
CI01000066_00642830_00643160 NA coding downstream 11751 642518 ~ 643249 (-)
CI01000066_00597946_00601637 FBXL13, FBXL14B, FBXL14, FBXL14.S, FBXL14A coding downstream 53363 597710 ~ 601637 (-)
CI01000066_00535081_00543543 NA coding downstream 111083 534908 ~ 543917 (-)
CI01000066_00438633_00446467 NA coding downstream 208299 438001 ~ 446701 (-)
CI01000066_00409321_00410208 NA coding downstream 244147 409022 ~ 410853 (-)
CI01000066_00675433_00675726 NA coding upstream 18678 674881 ~ 676211 (-)
CI01000066_00679999_00685380 NA coding upstream 23449 679652 ~ 685380 (-)
CI01000066_00711133_00728657 TTLL12 coding upstream 54930 711133 ~ 728657 (-)
CI01000066_00730057_00737661 PNPLA3 coding upstream 73512 729715 ~ 737661 (-)
CI01000066_00788981_00792403 NA coding upstream 132211 788414 ~ 792768 (-)
G271838 NA non-coding downstream 25246 628261 ~ 629754 (-)
G271788 NA non-coding downstream 31272 619707 ~ 623728 (-)
G271818 NA non-coding downstream 85825 568281 ~ 569175 (-)
G271802 NA non-coding downstream 88640 540367 ~ 566360 (-)
G271620 NA non-coding downstream 134050 518309 ~ 520950 (-)
G271772 NA non-coding upstream 8334 664537 ~ 666836 (-)
G271786 NA non-coding upstream 89733 745936 ~ 752890 (-)
CI01000066_00938534_00939532 NA non-coding upstream 281353 937351 ~ 939532 (-)
G271889 NA non-coding upstream 310017 966220 ~ 966453 (-)
G271890 NA non-coding upstream 310899 967102 ~ 967354 (-)
CI01000066_01823227_01826380 NA other upstream 1166826 1823029 ~ 1826817 (-)
CI01000066_01843043_01848783 NA other upstream 1185476 1842554 ~ 1849466 (-)
G272221 NA other upstream 1302899 1959102 ~ 1985228 (-)

Expression


Co-expression Network