XLOC_010445 (gask1a)


Basic Information

Item Value
gene id XLOC_010445
gene name gask1a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 8188188 ~ 8251985 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00020518
acttaactgaaaaaaatccaaggaatcatctttgaatattttttttttcagggacaGGGTTTCACAAAAAATGTAGACTGTGCAAGTCTTTCCACTGAGATTACAATGGAACAGACACATGTGAAAAATCCCTACCACATATGGAAAAGGGTGAAAGgaatatccagcatatgtgttcaACATCTAGACTATGAATGGAATTCCCTCTGAAAACATCCCCCTGAAATCCAAACTTCTTTTCCTGTTTAAGTTTACAAAGGATTTCTCTTTGAAATGTATGACCTACTTGCTGACTTTATTGTCCCATTTGTCTTTACAAACACCTTCTCCGCTGTGTCTTGCAGGCTTTAAGGCTGTGCATGAAGCTCAGACTGAAATGTCGGTTTGTGGTGGCCTTCCTGTTTCTCTTCAGCCTGTCAGTGGCGATAATATACACCCTTCCTCCATTCCAATCCGAGCAGATCAGAGCGAACGTACGAGGCCCTCGCAATAACAAACCTAGCAAGCTATTGGAGAAGTGGTCTCTGAGACCGTATAAGAAGCTTCCAGGCAAATCCTTGAAGAACCCTGAAATGAAAGATTCCGCTAAACATCTCCTGATGTTCAGTCATTTCCATCAAACGTTTTCCTCTGGAAAAATAGCTGAAGGAAAAGCATCAACCAAGAAGCCTTCAAGCAAACAATATATGAAGAATCCAAACAAACATCCAATCAAGTCATTCCGAGGCAGTGCCAAAAGGGCGCAAGCTGTTAGACTTCGAAATAGCAGCAGCTCCAACACAACCATCCATCTCCTTCGCTCCAGACATGACCAAGCATTCCCTCATTCCGCCAGCATCCGGAGCCTCCGCCCAAATAACAAGACATGCAGGCACAAATGCACTCCAGATGGGGACAAAGTAGAGAGGATTGTAGGCCACTTCTCCGATGCACAGCAGGTGGTAAAACTGAAACAAGCCCCTAGAGAAGCAGGAGCACATGAAAGACAAGCTGGGCCCTCTGAGAGGAAGAGGCCCAAATTTAAAACAGAAAGAGAGGCTGAGGCTGGCATCAGTGACTGGTGTAAGACTTTAAATGAAAGCTGGAACCAAACCAAAGCAGAGTCTCTCCCCTGGTTCAGTGCGGATGATATAAAGAAGATGGCACTTCTCTCCAGAGGCACTGTTGTGAGTAAAGCCCGGCTTCCCGGCCATGGACAAGTACTTCAAGTCGGATTAAGCGATAAAAATGACACCTTTGCATCTGCAGGTCATCTCAAACGCTGCCAGAAAGAAAGCTGCGCTCTCATAAAACGCCCTAATGACTGGTCTGAAGTGTTCGCCTTTCACCTGGACAGAGTTTTAGGTCTGAATCGGAGCTTGCCCGCAGTGTTAAGAGCATTTCACAGTGAGATTCTACCTTACAAATACACATCTGGATCTCCCAGACCGGTGGTATGGTGGGATCCTAGCATCCAACATCTGTCTGATGCTGAGAACGACCAGAACTCTTTCTCACTCACCTGGCCAGAATATCAGGCTCTGCTCAAGAGCAGATGTGGAATTCAGGTCCCGCTGAACTTCACCACATGTGTGGGAGTTCATCATTCAGAGTGGGGGCGACTGGCCTTGTTTGACTTCCTGCTGCAGGTTAATGACAGACTGGACCGGTCTTGCTGTGGTTTCAGAGCAGATCCATCCGATCTGTGTATTGAAAACCTGCTGCATGTCAAATGTGGAAACCCAAAGGACTTAAATCTGGTGCACATTCTGGTTCGGAAGACAGAACCATCCAAACTGGTTTTTATTGATAATGCAGGAAGACCTCATCAACCACATGACAATTTAAACTTCAGACTGGTTGAAGGTATTGATGAGTTTCCTGAGAAGGCTGTTTCAGTTCTGCAGTCGGGATGTCTGGAGAAGATGCTCCTTCACTCCCTGTCTGTGGATCAGGAATTCTGGCTGAGCAGAGAAGAGGCGTCCGGACTTAAATCCCTCATCCAGCACACAGAACAAAGAGCCAAGGCCTTGCTCCGGCACATACAAGAGAAGAATCTTCGGTTAAACAGAGATCTATAACTCTCTGATGTTGGAAATAACCAAATAATGAATTCCCAGATGACAGGAACATTAATGGAATTAATTTCAATCGTCTAAATTCATTTATATGCTTGTCTCAAATATGTTTGCTGTGCTGTTTAGAAAGTCAAGCAAAGCATGTTAGTTGGCTGAAATAAGAGGAAGCAGTATATTTGCATGGATTTTTGAGGCGATTTCCCTAATCAGACTTGACAGTCCTTGAACTGTGATTAACTGATGCTCTCAGTGTCTGAGAGAAGAAATCCCAGATGGTCATTTGCAGAGCAGGACTCATGTAGAGGGCCATCACTGTGAAGAGACCTGCACCATGTCCTAACCAgatacaatgcaaaaaaaaaaatcaacacaagctatttttttattttagtgctaAAAGTAAATGTGCTGTTTGACTGGACACTCAAACATggtgtcctaacaacatgtgaCGAAACAATATTACATTgacaagcaacacacacacacacacacacacacacacacacacacaaatgattcaaactactaatttaaaatgagctgtaacaacaattcttgagtgtttttaaacaatttaattgtcgtATGTTTAATGCAAGATGGGAACCTAATCTATTTGGGTTGGcataacatgaatgaattgtgtggaaccctgcatttgatgacaaaagcatttaaatgtcaacCATTCAAAAGCACTATACTCCTAACAAATGTGTTTAGaatctaatgaataagtattaAATtgcattaacattattaaaagtacattgCTGAGTAACTTATGTTGTTGGTTTGCACCGAATCAGCactagcattcattcattcactctttaCTTGCTAGTTATATTATTTTCCAGATCTGGGGTAAATTATCTGCTGGCATTTTCAGTACGGCAATAAAAGTCTCATAAAATGTGAATCAACCTCATACTGGTAACATTTAGTGCAGAATAAAGCACGTATTTAGTATCTGAGGTGGTGTTATCATTGTAGTTTAGCCACAGTGTCACATGAATTGAAATGGCTTTTAAAATAGAACCTCTGCACATCGCCATCACAGATAGTTTAGGCAATACAAATTATTTGaagatattttatatttaatgcacAGTTATAAGGACTTGACTAAAGAAAGGACAGGGTTACCTATGTGTGCAAAACCTTTCTTGAGAAGTGGGACAAACAAGGTGGGAAATAAAACACTCCaaacattttatcattttatcaaaaaatatttatcatttgaaTTTTGTCTTGGAAAAAAAGTTGTATGTAAgatttttgggtaacactttagaataac
>TCONS_00020519
CCTCTCCAAACCTCCACTCCGCTTTCCTTCTCAAGTCCAACGTGTTGCTGGAGATCAGAGCTTTGTTCTGAGACGTTGCAGACTTTGCATTGGAAACTGAAGAATAAGCCAATGGAAAGTTGCTAAACAATGACTTTGGATGCATCTCACGTGTACACTAATCCAGTTAAGATGAGAGCAACTTCAAGAAGGCTGAAGTGGTGGAATAATAGCCTGTTTACATGGATGAGGAGTGCAGGAATGAAGATGATGTGGCACTGATGCTGCGATTCGAGCAGAAGCTGCACGTTGACACTAGTGTTTGCAATGGCTTTAAGGCTGTGCATGAAGCTCAGACTGAAATGTCGGTTTGTGGTGGCCTTCCTGTTTCTCTTCAGCCTGTCAGTGGCGATAATATACACCCTTCCTCCATTCCAATCCGAGCAGATCAGAGCGAACGTACGAGGCCCTCGCAATAACAAACCTAGCAAGCTATTGGAGAAGTGGTCTCTGAGACCGTATAAGAAGCTTCCAGGCAAATCCTTGAAGAACCCTGAAATGAAAGATTCCGCTAAACATCTCCTGATGTTCAGTCATTTCCATCAAACGTTTTCCTCTGGAAAAATAGCTGAAGGAAAAGCATCAACCAAGAAGCCTTCAAGCAAACAATATATGAAGAATCCAAACAAACATCCAATCAAGTCATTCCGAGGCAGTGCCAAAAGGGCGCAAGCTGTTAGACTTCGAAATAGCAGCAGCTCCAACACAACCATCCATCTCCTTCGCTCCAGACATGACCAAGCATTCCCTCATTCCGCCAGCATCCGGAGCCTCCGCCCAAATAACAAGACATGCAGGCACAAATGCACTCCAGATGGGGACAAAGTAGAGAGGATTGTAGGCCACTTCTCCGATGCACAGCAGGTGGTAAAACTGAAACAAGCCCCTAGAGAAGCAGGAGCACATGAAAGACAAGCTGGGCCCTCTGAGAGGAAGAGGCCCAAATTTAAAACAGAAAGAGAGGCTGAGGCTGGCATCAGTGACTGGTGTAAGACTTTAAATGAAAGCTGGAACCAAACCAAAGCAGAGTCTCTCCCCTGGTTCAGTGCGGATGATATAAAGAAGATGGCACTTCTCTCCAGAGGCACTGTTGTGAGTAAAGCCCGGCTTCCCGGCCATGGACAAGTACTTCAAGTCGGATTAAGCGATAAAAATGACACCTTTGCATCTGCAGGTCATCTCAAACGCTGCCAGAAAGAAAGCTGCGCTCTCATAAAACGCCCTAATGACTGGTCTGAAGTGTTCGCCTTTCACCTGGACAGAGTTTTAGGTCTGAATCGGAGCTTGCCCGCAGTGTTAAGAGCATTTCACAGTGAGATTCTACCTTACAAATACACATCTGGATCTCCCAGACCGGTGGTATGGTGGGATCCTAGCATCCAACATCTGTCTGATGCTGAGAACGACCAGAACTCTTTCTCACTCACCTGGCCAGAATATCAGGCTCTGCTCAAGAGCAGATGTGGAATTCAGGTCCCGCTGAACTTCACCACATGTGTGGGAGTTCATCATTCAGAGTGGGGGCGACTGGCCTTGTTTGACTTCCTGCTGCAGGTTAATGACAGACTGGACCGGTCTTGCTGTGGTTTCAGAGCAGATCCATCCGATCTGTGTATTGAAAACCTGCTGCATGTCAAATGTGGAAACCCAAAGGACTTAAATCTGGTGCACATTCTGGTTCGGAAGACAGAACCATCCAAACTGGTTTTTATTGATAATGCAGGAAGACCTCATCAACCACATGACAATTTAAACTTCAGACTGGTTGAAGGTATTGATGAGTTTCCTGAGAAGGCTGTTTCAGTTCTGCAGTCGGGATGTCTGGAGAAGATGCTCCTTCACTCCCTGTCTGTGGATCAGGAATTCTGGCTGAGCAGAGAAGAGGCGTCCGGACTTAAATCCCTCATCCAGCACACAGAACAAAGAGCCAAGGCCTTGCTCCGGCACATACAAGAGAAGAATCTTCGGTTAAACAGAGATCTATAACTCTCTGATGTTGGAAATAACCAAATAATGAATTCCCAGATGACAGGAACATTAATGGAATTAATTTCAATCGTCTAAATTCATTTATATGCTTGTCTCAAATATGTTTGCTGTGCTGTTTAGAAAGTCAAGCAAAGCATGTTAGTTGGCTGAAATAAGAGGAAGCAGTATATTTGCATGGATTTTTGAGGCGATTTCCCTAATCAGACTTGACAGTCCTTGAACTGTGATTAACTGATGCTCTCAGTGTCTGAGAGAAGAAATCCCAGATGGTCATTTGCAGAGCAGGACTCATGTAGAGGGCCATCACTGTGAAGAGACCTGCACCATGTCCTAACCAgatacaatgcaaaaaaaaaaatcaacacaagctatttttttattttagtgctaAAAGTAAATGTGCTGTTTGACTGGACACTCAAACATggtgtcctaacaacatgtgaCGAAACAATATTACATTgacaagcaacacacacacacacacacacacacacacacacacacaaatgattcaaactactaatttaaaatgagctgtaacaacaattcttgagtgtttttaaacaatttaattgtcgtATGTTTAATGCAAGATGGGAACCTAATCTATTTGGGTTGGcataacatgaatgaattgtgtggaaccctgcatttgatgacaaaagcatttaaatgtcaacCATTCAAAAGCACTATACTCCTAACAAATGTGTTTAGaatctaatgaataagtattaAATtgcattaacattattaaaagtacattgCTGAGTAACTTATGTTGTTGGTTTGCACCGAATCAGCactagcattcattcattcactctttaCTTGCTAGTTATATTATTTTCCAGATCTGGGGTAAATTATCTGCTGGCATTTTCAGTACGGCAATAAAAGTCTCATAAAATGTGAATCAACCTCATACTGGTAACATTTAGTGCAGAATAAAGCACGTATTTAGTATCTGAGGTGGTGTTATCATTGTAGTTTAGCCACAGTGTCACATGAATTGAAATGGCTTTTAAAATAGAACCTCTGCACATCGCCATCACAGATAGTTTAGGCAATACAAATTATTTGaagatattttatatttaatgcacAGTTATAAGGACTTGACTAAAGAAAGGACAGGGTTACCTATGTGTGCAAAACCTTTCTTGAGAAGTGGGACAAACAAGGTGGGAAATAAAACACTCCaaacattttatcattttatcaaaaaatatttatcatttgaaTTTTGTCTTGGAAAAAAAGTTGTATGTAAgatttttgggtaacactttagaataac

Function

symbol description
gask1a Predicted to be located in Golgi apparatus and membrane. Orthologous to human GASK1A (golgi associated kinase 1A).

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-121130-2 Predicted to be located in Golgi apparatus and membrane. Orthologous to human GASK1A (golgi associated kinase 1A).

Ensembl:

ensembl_id ENSDARG00000076862

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00020518 False 3366 mRNA 0.41 4 8188188 8217495
TCONS_00020519 True 3331 mRNA 0.42 5 8188188 8251985

Neighbor

gene id symbol gene type direction distance location
XLOC_010444 NA coding downstream 45876 8140712 ~ 8142312 (-)
XLOC_010443 snrka coding downstream 55446 8047896 ~ 8132742 (-)
XLOC_010442 CU856516.1 coding downstream 203287 7968020 ~ 7984901 (-)
XLOC_010441 NA coding downstream 306911 7834219 ~ 7881277 (-)
XLOC_010440 tcaim coding downstream 359340 7802730 ~ 7828848 (-)
XLOC_010446 entpd3 coding upstream 6218 8258203 ~ 8280885 (-)
XLOC_010447 CR478208.1 coding upstream 35786 8287771 ~ 8288447 (-)
XLOC_010448 ddc coding upstream 46557 8298542 ~ 8342749 (-)
XLOC_010449 grb10b coding upstream 112100 8364085 ~ 8520474 (-)
XLOC_010450 CU062417.1 coding upstream 226895 8478880 ~ 8479009 (-)
XLOC_010626 CR392024.2 misc upstream 12643127 20895112 ~ 20895175 (-)
XLOC_010438 BX511173.1 non-coding downstream 491972 7693881 ~ 7696216 (-)
XLOC_010436 NA non-coding downstream 567073 7508101 ~ 7621115 (-)
XLOC_010452 NA non-coding upstream 416996 8668981 ~ 8679462 (-)
XLOC_010455 CR394537.1 non-coding upstream 1050094 9302079 ~ 9302194 (-)
XLOC_010458 FO704756.1 non-coding upstream 1312518 9564503 ~ 9566371 (-)

Expression


Co-expression Network