Gene
RNA
| Item | Value |
|---|---|
| gene id | G271896 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000066 |
| NCBI id | null |
| chromosome length | 3719324 |
| location | 1038865 ~ 1039137 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU308553 | True | 273 | lncRNA | 0.30 | 1 | 1038865 | 1039137 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000066_01031147_01037984 | HCFC2 | coding | downstream | 878 | 1030887 ~ 1037987 (-) |
| CI01000066_00975554_00997209 | CHST11 | coding | downstream | 41448 | 974988 ~ 997417 (-) |
| CI01000066_00938534_00939532 | NA | coding | downstream | 99333 | 937351 ~ 939532 (-) |
| CI01000066_00885041_00912917 | SCUBE1 | coding | downstream | 125948 | 884544 ~ 912917 (-) |
| CI01000066_00858315_00871460 | SCUBE1 | coding | downstream | 167324 | 858278 ~ 871541 (-) |
| CI01000066_01046248_01048613 | AVPR1AB, AVPR1A | coding | upstream | 7084 | 1046221 ~ 1049364 (-) |
| CI01000066_01152726_01162533 | C18H12ORF66, CLG8H12ORF66, C19H12ORF66, CUNH12ORF66, CSSA07H12ORF66, CLG23H12ORF66 | coding | upstream | 113194 | 1152331 ~ 1162533 (-) |
| CI01000066_01270085_01272411 | NA | coding | upstream | 230349 | 1269486 ~ 1272635 (-) |
| CI01000066_01278191_01288171 | NA | coding | upstream | 238340 | 1277477 ~ 1289175 (-) |
| CI01000066_01300862_01328030 | SHANK3B | coding | upstream | 260601 | 1299738 ~ 1328182 (-) |
| G271891 | NA | non-coding | downstream | 16619 | 1022033 ~ 1022246 (-) |
| G271890 | NA | non-coding | downstream | 71511 | 967102 ~ 967354 (-) |
| G271889 | NA | non-coding | downstream | 72412 | 966220 ~ 966453 (-) |
| G271786 | NA | non-coding | downstream | 285975 | 745936 ~ 752890 (-) |
| G271912 | NA | non-coding | upstream | 10873 | 1050010 ~ 1050249 (-) |
| G271914 | NA | non-coding | upstream | 13433 | 1052570 ~ 1052799 (-) |
| G271915 | NA | non-coding | upstream | 14151 | 1053288 ~ 1053531 (-) |
| G271917 | NA | non-coding | upstream | 16716 | 1055853 ~ 1056096 (-) |
| G271918 | NA | non-coding | upstream | 19659 | 1058796 ~ 1059067 (-) |
| CI01000066_01823227_01826380 | NA | other | upstream | 783892 | 1823029 ~ 1826817 (-) |
| CI01000066_01843043_01848783 | NA | other | upstream | 802542 | 1842554 ~ 1849466 (-) |
| G272221 | NA | other | upstream | 919965 | 1959102 ~ 1985228 (-) |
