XLOC_010446 (entpd3)


Basic Information

Item Value
gene id XLOC_010446
gene name entpd3
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 8258203 ~ 8280885 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00020520
ACACATTCAGTCTTGCACGTCTTGACAGCATGATCAATAAGGAGTCCCAGTCTTCAGACCACCTTACAGTAGCCTCACGCAGAGGGGTAAGGATGGCAAAAGTGGCTGTTGTTTTGGCCGCCGCCTTTATGCTGGCCAGCATAGCAGTCATCATTTCAATAGCAGTTGTACAGACCCAAAAGAAGACTTATGTTTCCCGTGGACTAAAGTATGGTATTGTTTTGGATGCAGGCTCTTCCCGGACTACTGTGTATCTCTATGAATGGCCTGCAGAGAAAGAAAACAACACGGGGGTTGTGAGTCAGACCACAAAGTGTCTAGTTAAAGGTCCTGGAATTTCAGATCTTGGTTTAGATGGGGATCAAGACCAAAAGACATGGAACAGCTTAAAAGAGTGCATGAAAAATATGACTGAGGCCATTCCTTCCCATCAGCACAACTCGACCCCTGTCTTCCTTGGGGCAACAGCAGGAATGAGGCTCCTACATATGACAAATGAAGGGAGATCCAATGATGTCCTGACACAAATGAAGAACTACCTTAGCTCTCTTCCTTTCAAATTCCAAAATGCTTCCATCATTTCTGGACAAGAAGAAGGCCTTTATGGCTGGATCACTGTCAACTACCTGAAAGGAAACTTCTTAGAGAAAAATCTTTGGAATGCCTGGGTACATCCTCATGGGGCTAAGACAGTTGGGTCATTGGATTTGGGGGGAGCGTCAACGCAGATTGCCTTTGCTACTTCTGATGATGCTAAAGGCGAAGATATCATTAAAGTTTCACTCTACGGCTATGAATACAACATCTATACACACAGCTTCCTCTGCTATGGGAAGAATGAAGCTGAGAAGAGAGTTTTGGCCAAACTTGCAAAGGAACCCATCAACTGGGCTAATGTGAAGCACCCCTGTTTTCCTACTGGCTACAATACCTCCATACCTGCAGAGGAGATTTTTGGCAGTGAATGTACAAAGAACAATGTCCCTTCAAGATATGACCCAAAGCGTTCAATTACTTTCTTTGGACAGAGCAACCCTGAACAGTGCAAAGCCTTGGTCAGGAGTATCTTTGACCTCACATCCTGCCAGGGAACAGAAAACTGCTCCTTTGATGGAGTTTATCAACCTCCGCTAAATGGAGACTTCACAgccTATGCGGGGTTCTACTGGACTGCTTTGGCTTTAAAAGTGAATGGTTCCAATAGCATGGAGAAATTTAACACAAACATGAAGCTCTTCTGCTCAAACGATTGGAAAAATCTCAAGCAGAACTATGAGAACAAAGACAGTCATCTCAAGTCCTTCTGCTACTCTGCAAATTACGTGCACACTATTCTTGCTGATGGTTACAAATTCAACACAGACAACTGGGAAAATCTCGAGTTTAGCAAAGAGGTAAATAATACCAGTATAGCCTGGTCCCTGGGCTATATGCTTGCACTTTCCAACATGATCCCAGCCGAAGGGAAAATCATCAAGCTACCCATAAACAATGTTCTCTTCACTGGCCTCCTCCTGCTGTTTTCTGTGTTGACTATTATCACCCTCACATACCTCGTCATTGCACTGGTGCGCTACTGTTATTGAGGTTTTATCTGTCCCGAGTTCTCCTCTGTAGAACTAGTGTCCCACTTAGGGAAGTTTAGTAAAACCAGGAAAGACACACCGATTTGTCAGTGTAGATGGTTCTGCCGGAAATGGATTTTAGTTTTGAGACCTGAAGATCTTGAAAGTGTTGAGATTAAAAAGACACCTGATGTTAATTCCAAACCTGTACAAATCtgtattaaaatgacattttgtaCAAAAGAGAGTGCACTGGTATTTCGAGATTAGAAATACAGTGGCAAATTCTTGTACCGTGGATCTGAACGAGGAGACTGAAAACACAGTAAAGGTTTTAGTATATATATAGAGTAAATGTATCTATACTATTGTCATGGCAATCTGATTATTGTATGTAATGTTTGTCTTATTCAATTGCATCATGTTTATGTACATCTTACGCATATATTTCTGCATGTGCTATTTGGCACACATTGTTTTTGGATGAAAATATGTCAtagtactataaataaataaatgttatggtTGCTAA

Function

symbol description
entpd3 Predicted to enable guanosine-diphosphatase activity and uridine-diphosphatase activity. Predicted to be involved in nucleoside diphosphate catabolic process. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Is expressed in Rohon-Beard neurons; brain; cranial ganglion; heart; and liver. Orthologous to human ENTPD3 (ectonucleoside triphosphate diphosphohydrolase 3).

GO:

id name namespace
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005524 ATP binding molecular_function
GO:0016787 hydrolase activity molecular_function
GO:0000166 nucleotide binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-030131-6186 Predicted to enable guanosine-diphosphatase activity and uridine-diphosphatase activity. Predicted to be involved in nucleoside diphosphate catabolic process. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Is expressed in Rohon-Beard neurons; brain; cranial ganglion; heart; and liver. Orthologous to human ENTPD3 (ectonucleoside triphosphate diphosphohydrolase 3).

Ensembl:

ensembl_id ENSDARG00000035309

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00020520 True 2097 mRNA 0.42 10 8258203 8280885

Neighbor

gene id symbol gene type direction distance location
XLOC_010445 gask1a coding downstream 6218 8188188 ~ 8251985 (-)
XLOC_010444 NA coding downstream 115891 8140712 ~ 8142312 (-)
XLOC_010443 snrka coding downstream 125461 8047896 ~ 8132742 (-)
XLOC_010442 CU856516.1 coding downstream 273302 7968020 ~ 7984901 (-)
XLOC_010441 NA coding downstream 376926 7834219 ~ 7881277 (-)
XLOC_010447 CR478208.1 coding upstream 6886 8287771 ~ 8288447 (-)
XLOC_010448 ddc coding upstream 17657 8298542 ~ 8342749 (-)
XLOC_010449 grb10b coding upstream 83200 8364085 ~ 8520474 (-)
XLOC_010450 CU062417.1 coding upstream 197995 8478880 ~ 8479009 (-)
XLOC_010451 cobl coding upstream 248887 8529772 ~ 8663552 (-)
XLOC_010626 CR392024.2 misc upstream 12614227 20895112 ~ 20895175 (-)
XLOC_010438 BX511173.1 non-coding downstream 561987 7693881 ~ 7696216 (-)
XLOC_010436 NA non-coding downstream 637088 7508101 ~ 7621115 (-)
XLOC_010452 NA non-coding upstream 388096 8668981 ~ 8679462 (-)
XLOC_010455 CR394537.1 non-coding upstream 1021194 9302079 ~ 9302194 (-)
XLOC_010458 FO704756.1 non-coding upstream 1283618 9564503 ~ 9566371 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000016_10931329_10940939 ENTPD3 coding CI01000016 null 10930812 ~ 10941053 (-)