G270855


Basic Information

Item Value
gene id G270855
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000066
NCBI id null
chromosome length 3719324
location 1323495 ~ 1324025 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU307374
GAGGGTATGTAAATCTTGGAGTAATTTTCATTTTAAACTGAACTAATCCTTTAATGCATCCTTGCTGAATAAAAGTATTCTTACTGACCACAAACATTTTAACGGTAGTGTACAGTACATGAATGTTAAACATTACCTTGGTATGTAGTTTGGCCAGTTGCTTGTCATCTACATAGCTCTGAGTGTAAACACGCCTCTTGTAACGGAACTCTAGGTACGGTACAGGTGTGATTGTAGGGAGAGGATACTCCCTGAGCAATCGCTCCTCATCGAGGAACTTTCCGGCACGCCCATTAAAGGCAGGGAGGTAGAGGCCATAGTTAAGCACATCGGTCAGGCTTTGTGTCAGAGTGACCAGAACTCGCTGCTTACAAACCCACACTGGAGCCTCAAGGTCCAATCGCAGGCATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU307374 True 411 lncRNA 0.44 2 1323495 1324025

Neighbor

gene id symbol gene type direction distance location
CI01000066_01245954_01257380 NA coding upstream 66115 1245954 ~ 1257380 (+)
CI01000066_01236972_01244870 NA coding upstream 78383 1236972 ~ 1245112 (+)
CI01000066_01187709_01232765 TMTC1 coding upstream 90730 1187296 ~ 1232765 (+)
CI01000066_01165569_01184166 IPO8 coding upstream 138483 1165569 ~ 1185012 (+)
CI01000066_01110448_01145292 SRGAP1A, SRGAP1B, SRGAP1 coding upstream 177512 1110350 ~ 1145983 (+)
CI01000066_01334756_01335057 NA coding downstream 10731 1334756 ~ 1335526 (+)
CI01000066_01339972_01347463 HSPA14 coding downstream 15947 1339972 ~ 1347463 (+)
CI01000066_01358866_01360100 NDUFA5 coding downstream 34841 1358866 ~ 1360493 (+)
CI01000066_01433027_01434982 NA coding downstream 109002 1433027 ~ 1435523 (+)
CI01000066_01435756_01447201 NA coding downstream 111731 1435756 ~ 1448712 (+)
G270831 NA non-coding upstream 248789 1074219 ~ 1074706 (+)
G270827 NA non-coding upstream 263761 1059515 ~ 1059734 (+)
G270801 NA non-coding upstream 264806 1057009 ~ 1058689 (+)
CI01000066_01021163_01021546 NA non-coding upstream 301590 1020687 ~ 1022630 (+)
G270803 NA non-coding upstream 314685 1008046 ~ 1008810 (+)
G270864 NA non-coding downstream 30090 1354115 ~ 1355390 (+)
G270877 NA non-coding downstream 75548 1399573 ~ 1399784 (+)
G270720 NA non-coding downstream 80750 1404775 ~ 1408011 (+)
G270902 NA non-coding downstream 349389 1673414 ~ 1687198 (+)
G270901 NA non-coding downstream 366105 1690130 ~ 1698632 (+)
G270546 NA other upstream 1136818 184528 ~ 186677 (+)
CI01000066_00019553_00029834 PAHX, PHYH other upstream 1303222 19447 ~ 30531 (+)
G270973 NA other downstream 520427 1844452 ~ 1847752 (+)
CI01000066_02274624_02277624 NA other downstream 945144 2274557 ~ 2278119 (+)
CI01000066_02296138_02305439 CMAH other downstream 978185 2296071 ~ 2305637 (+)
G271105 NA other downstream 1106685 2430710 ~ 2439169 (+)

Expression


Co-expression Network