Gene
RNA
| Item | Value |
|---|---|
| gene id | G272149 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000066 |
| NCBI id | null |
| chromosome length | 3719324 |
| location | 1553913 ~ 1554144 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU308835 | True | 232 | lncRNA | 0.37 | 1 | 1553913 | 1554144 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000066_01409396_01418995 | SLC13A4 | coding | downstream | 134918 | 1408854 ~ 1418995 (-) |
| CI01000066_01362241_01380080 | PTPRZ1B, PTPRZ1 | coding | downstream | 173833 | 1361492 ~ 1380080 (-) |
| CI01000066_01349294_01355967 | DCLRE1C | coding | downstream | 197946 | 1349187 ~ 1356018 (-) |
| CI01000066_01337577_01339728 | CDNF | coding | downstream | 214046 | 1337317 ~ 1339867 (-) |
| CI01000066_01300862_01328030 | SHANK3B | coding | downstream | 225731 | 1299738 ~ 1328182 (-) |
| CI01000066_01562872_01567304 | NA | coding | upstream | 7698 | 1561842 ~ 1567485 (-) |
| CI01000066_01584461_01588350 | GNS, GNSA | coding | upstream | 30141 | 1584285 ~ 1588350 (-) |
| CI01000066_01660506_01700883 | ANO2 | coding | upstream | 105791 | 1659935 ~ 1700883 (-) |
| CI01000066_01716840_01717090 | SMKR1 | coding | upstream | 162533 | 1716677 ~ 1717090 (-) |
| CI01000066_01737004_01739028 | NA | coding | upstream | 182510 | 1736654 ~ 1739498 (-) |
| G272140 | NA | non-coding | downstream | 19041 | 1534655 ~ 1534872 (-) |
| G272059 | NA | non-coding | downstream | 117461 | 1433003 ~ 1436452 (-) |
| G271904 | NA | non-coding | downstream | 205845 | 1339958 ~ 1348068 (-) |
| G271898 | NA | non-coding | downstream | 277070 | 1275708 ~ 1276843 (-) |
| G272165 | NA | non-coding | upstream | 41596 | 1595740 ~ 1598429 (-) |
| G272193 | NA | non-coding | upstream | 149566 | 1703710 ~ 1703911 (-) |
| G272194 | NA | non-coding | upstream | 149847 | 1703991 ~ 1704264 (-) |
| G272053 | NA | non-coding | upstream | 245820 | 1799964 ~ 1801427 (-) |
| G272066 | NA | non-coding | upstream | 254538 | 1808682 ~ 1812113 (-) |
| CI01000066_01823227_01826380 | NA | other | upstream | 268885 | 1823029 ~ 1826817 (-) |
| CI01000066_01843043_01848783 | NA | other | upstream | 287535 | 1842554 ~ 1849466 (-) |
| G272221 | NA | other | upstream | 404958 | 1959102 ~ 1985228 (-) |
